RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 TIAF1O95411 115 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 MAOAP21397 527 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 RPS4Y1P22090 263 aaKnown RBP11.28□□□□□ -0.6
SNU13-201ENST00000215956 LCN1P31025 176 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 RPL5P46777 297 aaKnown RBP11.28□□□□□ -0.6
SNU13-201ENST00000215956 YAP1P46937 504 aaKnown RBP11.28□□□□□ -0.6
SNU13-201ENST00000215956 UGT2B15P54855 530 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 RGS8P57771 180 aaPredicted RBP11.28□□□□□ -0.6
SNU13-201ENST00000215956 TAS2R41P59536 307 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 RPS18P62269 152 aaKnown RBP11.28□□□□□ -0.6
SNU13-201ENST00000215956 CSNK2BP67870 215 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 BTG2P78543 158 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 OCA2Q04671 838 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 ST3GAL3Q11203 375 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 PPP1R8Q12972 351 aaKnown RBP11.28□□□□□ -0.6
SNU13-201ENST00000215956 IL10RAQ13651 578 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 EXOSC7Q15024 291 aaKnown RBP11.28□□□□□ -0.6
SNU13-201ENST00000215956 ELAVL1Q15717 326 aaKnown RBP11.28□□□□□ -0.6
SNU13-201ENST00000215956 SYT16Q17RD7 645 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 MINDY4Q4G0A6 757 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 FGD3Q5JSP0 725 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 TSPYL5Q86VY4 417 aaPredicted RBP11.28□□□□□ -0.6
SNU13-201ENST00000215956 DEPDC4Q8N2C3 294 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 TSPAN14Q8NG11 270 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 OR14A16Q8NHC5 309 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 HDAC2Q92769 488 aaKnown RBP11.28□□□□□ -0.6
SNU13-201ENST00000215956 MBOAT4Q96T53 435 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 GPR87Q9BY21 358 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 TGIF2Q9GZN2 237 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 OR10A5Q9H207 317 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 ANKRA2Q9H9E1 313 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 NMNAT1Q9HAN9 279 aaPredicted RBP11.28□□□□□ -0.6
SNU13-201ENST00000215956 DHCR7Q9UBM7 475 aaKnown RBP11.28□□□□□ -0.6
SNU13-201ENST00000215956 PCDHGB7Q9Y5F8 929 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 GMPPBQ9Y5P6 360 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 CLCA3PQ9Y6N3 262 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 POLEQ07864 2286 aa11.28□□□□□ -0.6
SNU13-201ENST00000215956 NUP214P35658 2090 aaPredicted RBP11.28□□□□□ -0.6
SNU13-201ENST00000215956 IGKV3D-11A0A0A0MRZ8 115 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 PRAMEF25A6NGN4 478 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 A6NHS1 94 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 C17orf105B2RV13 164 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 FMO6PO60774 539 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 SMNDC1O75940 238 aaKnown RBP eCLIP11.27□□□□□ -0.6
SNU13-201ENST00000215956 OR5F1O95221 314 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 NID1P14543 1247 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 S1PR1P21453 382 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 RORAP35398 523 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 SOX18P35713 384 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 OR1D4P47884 311 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 EMDP50402 254 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 NR1H2P55055 460 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 ESRRGP62508 458 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 NPRL3Q12980 569 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 GANABQ14697 944 aaKnown RBP11.27□□□□□ -0.6
SNU13-201ENST00000215956 GPR68Q15743 365 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 CYP27C1Q4G0S4 372 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 ZNF691Q5VV52 312 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 TMEM151BQ8IW70 566 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 CMIPQ8IY22 773 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 PLPP5Q8NEB5 264 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 OR52J3Q8NH60 311 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 SLC38A4Q969I6 547 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 C5orf34Q96MH7 638 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 VSTM2LQ96N03 204 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 MUS81Q96NY9 551 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 FEVQ99581 238 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 PITX2Q99697 317 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 GRIP2Q9C0E4 1043 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 HOXD1Q9GZZ0 328 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 VCX3AQ9NNX9 186 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 NECTIN3Q9NQS3 549 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.27□□□□□ -0.6
SNU13-201ENST00000215956 ERVK-19Q9WJR5 959 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 PCDHGA10Q9Y5H3 936 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 CSMD2Q7Z408 3487 aa11.27□□□□□ -0.6
SNU13-201ENST00000215956 SPTBP11277 2137 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 MYOCOSA0A1B0GUC4 107 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 TCRBV16S1A1N1A0A5B0 115 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 OR6C76A6NM76 312 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 J3KTA2 159 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 M0R3H8 397 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 SCRG1O75711 98 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 SEC24DO94855 1032 aaPredicted RBP11.27□□□□□ -0.61
SNU13-201ENST00000215956 ONECUT2O95948 504 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 GSTM3P21266 225 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 AGXTP21549 392 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 GABARAPL2P60520 117 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 DCDP81605 110 aaKnown RBP11.27□□□□□ -0.61
SNU13-201ENST00000215956 COX10Q12887 443 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 TRAM2Q15035 370 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 FLYWCH1Q4VC44 716 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 SLC6A19Q695T7 634 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 PLEKHM3Q6ZWE6 761 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 RRM2BQ7LG56 351 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 GALNT5Q7Z7M9 940 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 VRK2Q86Y07 508 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 SLC5A8Q8N695 610 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 PNPLA2Q96AD5 504 aa11.27□□□□□ -0.61
SNU13-201ENST00000215956 CLIP3Q96DZ5 547 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms