RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 COPZ1P61923 177 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 MAT1AQ00266 395 aaKnown RBP7.65□□□□□ -1.18
VAMP3-201ENST00000054666 PSG6Q00889 435 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 DOC2BQ14184 412 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 GAS6Q14393 721 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 ZNF267Q14586 743 aaPredicted RBP7.65□□□□□ -1.18
VAMP3-201ENST00000054666 DEFB133Q30KQ1 61 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 AADACL4Q5VUY2 407 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 WDR88Q6ZMY6 472 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 DGAT2L6Q6ZPD8 337 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 SHFQ7M4L6 423 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 ZNF550Q7Z398 422 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 SNX29P2Q8IUI4 249 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 GRAMD2AQ8IUY3 354 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 BPIFA2Q96DR5 249 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 ZDHHC12Q96GR4 267 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 UBQLN3Q9H347 655 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 TOR4AQ9NXH8 423 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 RPS6KB2Q9UBS0 482 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 ZNF223Q9UK11 482 aaPredicted RBP7.65□□□□□ -1.18
VAMP3-201ENST00000054666 GSTK1Q9Y2Q3 226 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 KNL1Q8NG31 2342 aa7.65□□□□□ -1.19
VAMP3-201ENST00000054666 A0A0B4J2E0 115 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 A0A1B0GX12 115 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 SYNDIG1LA6NDD5 238 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 LOC110117498-PIK3R3F6TDL0 507 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 RGS5O15539 181 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 HCN1O60741 890 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 DRD5P21918 477 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 MAOBP27338 520 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 GABRA5P31644 462 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 RBM34P42696 430 aaKnown RBP7.64□□□□□ -1.19
VAMP3-201ENST00000054666 ARL4DP49703 201 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 EMDP50402 254 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 EPHA4P54764 986 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 GAS1P54826 345 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 GFERP55789 205 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 HSD17B7P56937 341 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 IGLV3-21P80748 117 aaPredicted RBP7.64□□□□□ -1.19
VAMP3-201ENST00000054666 BNC1Q01954 994 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 KRR1Q13601 381 aaKnown RBP7.64□□□□□ -1.19
VAMP3-201ENST00000054666 SERTAD2Q14140 314 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 GRM7Q14831 915 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 C14orf28Q4W4Y0 310 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 ALG10BQ5I7T1 473 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 ARMC4Q5T2S8 1044 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 OR2G6Q5TZ20 316 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 ZC3H14Q6PJT7 736 aaKnown RBP7.64□□□□□ -1.19
VAMP3-201ENST00000054666 SMARCD3Q6STE5 483 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 ZAR1Q86SH2 424 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 SDR16C5Q8N3Y7 309 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 PARP16Q8N5Y8 322 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 METTL27Q8N6F8 245 aaPredicted RBP7.64□□□□□ -1.19
VAMP3-201ENST00000054666 GATAD2BQ8WXI9 593 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 CNOT9Q92600 299 aaKnown RBP7.64□□□□□ -1.19
VAMP3-201ENST00000054666 SLC35B4Q969S0 331 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 AHCYL2Q96HN2 611 aaKnown RBP7.64□□□□□ -1.19
VAMP3-201ENST00000054666 SHDQ96IW2 340 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 HSPA12BQ96MM6 686 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 KCTD7Q96MP8 289 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 VSTM2LQ96N03 204 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 KCNS3Q9BQ31 491 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 IFT27Q9BW83 186 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 HINT3Q9NQE9 182 aaKnown RBP7.64□□□□□ -1.19
VAMP3-201ENST00000054666 SNTG1Q9NSN8 517 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 TNFRSF10DQ9UBN6 386 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 PRODH2Q9UF12 536 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 ERVK-19Q9WJR5 959 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 GON4LQ3T8J9 2241 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 A0A1B0GWA3 101 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 KRBA1A5PL33 1030 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 RIIAD1A6NNX1 92 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 LMO7DNF2Z398 122 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 H0YIG0 161 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 WWP2O00308 870 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 DYRK3O43781 588 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 IL1AP01583 271 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 ZNF3P17036 446 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 MAKP20794 623 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 S1PR1P21453 382 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 ETV6P41212 452 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 CTBP2P56545 445 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 DEFA1P59665 94 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 DEFA3P59666 94 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 RPS7P62081 194 aaKnown RBP7.64□□□□□ -1.19
VAMP3-201ENST00000054666 IFITM3Q01628 133 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 BIKQ13323 160 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 SMAD2Q15796 467 aaKnown RBP7.64□□□□□ -1.19
VAMP3-201ENST00000054666 CCDC85BQ15834 202 aaPredicted RBP7.64□□□□□ -1.19
VAMP3-201ENST00000054666 PLK5Q496M5 336 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 PLBD1Q6P4A8 553 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 CHRDL2Q6WN34 429 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 TMPRSS11FQ6ZWK6 438 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 GATAD2AQ86YP4 633 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 LYSMD2Q8IV50 215 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 CPOQ8IVL8 374 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 CMIPQ8IY22 773 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 ZNF687Q8N1G0 1237 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 SLC43A2Q8N370 569 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 OR4F15Q8NGB8 312 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms