RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 UQCC3Q6UW78 93 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 CLEC10AQ8IUN9 316 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF75AQ96N20 296 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 SLC2A9Q9NRM0 540 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 AGPAT4Q9NRZ5 378 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 TMEM131Q92545 1883 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 LOC100509620A0A075B734 347 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 KIR2DS5A0A0G2JLQ3 304 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 A0A0G2JNG1 304 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 MROH6A6NGR9 719 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 C12orf71A8MTZ7 269 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 KIR2DS3K7RE56 304 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 P04436 131 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 HLA-DQB2P05538 268 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 CHRM1P11229 460 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 CALCRP30988 508 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 AHRP35869 848 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 ENTPD1P49961 510 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 OC90Q02509 493 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 KIR2DS5Q14953 304 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 CTU2Q2VPK5 515 aaKnown RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 GFOD2Q3B7J2 385 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 RGMBQ6NW40 437 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 VTCN1Q7Z7D3 282 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 ZC3H3Q8IXZ2 948 aaKnown RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 FAM160A2Q8N612 972 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 OR52N2Q8NGI0 321 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 OR4K15Q8NH41 348 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 SGK3Q96BR1 496 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 TRMT2BQ96GJ1 504 aaKnown RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 C10orf90Q96M02 699 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 PRRC1Q96M27 445 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 DCLRE1CQ96SD1 692 aaKnown RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 ADAM19Q9H013 955 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 CORINQ9Y5Q5 1042 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 G6PDP11413 515 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 PBX2P40425 430 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 RNF144AP50876 292 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 LCN6P62502 163 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 UEVLDQ8IX04 471 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 IL17RDQ8NFM7 739 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 AUTS2Q8WXX7 1259 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 DMRTB1Q96MA1 342 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 PITX2Q99697 317 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 CPA4Q9UI42 421 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 SIGLEC1Q9BZZ2 1709 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 OR5H15A6NDH6 313 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 OR5H14A6NHG9 310 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 OR5H1A6NKK0 313 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 SYT7O43581 403 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 FXYD6P3P58550 94 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 MAP1SQ66K74 1059 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 HBMQ6B0K9 141 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 FAM111BQ6SJ93 734 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 PYROXD2Q8N2H3 581 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 KREMEN2Q8NCW0 462 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 FAM83FQ8NEG4 500 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 NUP43Q8NFH3 380 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 KCNG3Q8TAE7 436 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 BRIX1Q8TDN6 353 aaKnown RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 ALG8Q9BVK2 526 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 TRAPPC6AO75865 159 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 JUNP05412 331 aaKnown RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 NCK1P16333 377 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 CNR1P21554 472 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 AK4P27144 223 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 EVI2BP34910 448 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 SOHLH1Q5JUK2 328 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 VRK3Q8IV63 474 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 SLC35F3Q8IY50 421 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 FAM185AQ8N0U4 392 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 METTL4Q8N3J2 472 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 PTCHD1Q96NR3 888 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 ATG10Q9H0Y0 220 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 EPHX3Q9H6B9 360 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 LIN7BQ9HAP6 207 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 OR1A2Q9Y585 309 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 STYXL1Q9Y6J8 313 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 VILLO15195 856 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 HLA-AP01891 365 aaKnown RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 CSF3P09919 207 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 SNCAP37840 140 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 PREPP48147 710 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 RABGGTBP53611 331 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 DLX2Q07687 328 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 PLA1AQ53H76 456 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 KRBOX4Q5JUW0 171 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 PM20D1Q6GTS8 502 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 NAXEQ8NCW5 288 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 LSM14AQ8ND56 463 aaKnown RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 LRCH3Q96II8 777 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 P2RY13Q9BPV8 354 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 DEFB126Q9BYW3 111 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 RBFOX1Q9NWB1 397 aaKnown RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 ZDHHC2Q9UIJ5 367 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 USF3Q68DE3 2245 aa5.75□□□□□ -1.49
VPS13D-201ENST00000011700 TRPM3Q9HCF6 1732 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-201ENST00000011700 THADAQ6YHU6 1953 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 FMO6PO60774 539 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 ZDHHC11BP0C7U3 371 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms