RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Zfp955bL7N232 545 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Nrg2P56974 756 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rab3aP63011 220 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn1r189Q8K3N3 312 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr461Q8VF30 313 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rab28Q99KL7 221 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Q9D112 206 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Slc6a19Q9D687 634 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 RhcgQ9QXP0 498 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 NcdnQ9Z0E0 729 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm34653A0A1L1SR01 368 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 TazI7HJS2 263 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Mllt10O54826 1068 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Il6raP22272 460 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Kcnk12Q76M80 430 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr304Q7TS03 333 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr791Q8VGJ0 312 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Mfsd1Q9DC37 464 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tm9sf3Q9ET30 587 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Adat1Q9JHI2 499 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Kiaa1522A2A7S8 1013 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 FggyA2AJL3 552 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 AmbnO55189 407 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Hnf1aP22361 628 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Wnt4P22724 351 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Clec10aP49300 304 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Eef1a2P62631 463 aaKnown RBP11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Pomt1Q8R2R1 746 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rnf167Q91XF4 347 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gpr45Q9EQQ4 373 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 B9d1Q9R1S0 204 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 ChadO55226 358 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 P06335 190 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 SiaeP70665 541 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Lsmem1Q3UQS2 128 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Slc35a1Q61420 336 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr871Q7TRF0 311 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Slc7a6Q8BGK6 515 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Nceh1Q8BLF1 408 aaKnown RBP11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ddit4lQ8VHZ5 193 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Hint3Q9CPS6 165 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Fundc1Q9DB70 155 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ramp2Q9WUP0 189 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm13124A2A752 406 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn2r105E9Q3A5 860 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn2r95L7N274 845 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Dpm1O70152 260 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ccr7P47774 378 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ranbp9P69566 653 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Fam105aQ3TVP5 353 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tstd2Q3U269 495 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Q3UTZ3 580 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Nsg1Q62092 185 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Nfatc4Q8K120 901 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Itfg2Q91WI7 443 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ash2lQ91X20 623 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Smarcd2Q99JR8 531 aaKnown RBP11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Sipa1l1Q8C0T5 1782 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rpl23a-ps3A0A140T8M7 156 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Lrr1D3YY91 422 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm3543D3Z235 184 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Bet1O35623 118 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cacng1O70578 223 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rad52P43352 420 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rpl23aP62751 156 aaKnown RBP11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Hyal4Q05A56 481 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm11487Q5RIS0 354 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cxcl17Q5UW37 119 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 GcdhQ60759 438 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ppp1r3bQ8C767 284 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Irak3Q8K4B2 609 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn1r212Q8R268 357 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr518Q8VEW1 333 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Acot7Q91V12 381 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Col1a1P11087 1453 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Man2b2O54782 1018 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Htr2aP35363 471 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Nploc4P60670 608 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Usp17laQ61068 526 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Methig1Q76I26 264 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Q8BPC6 396 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Mrc1Q61830 1456 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Pik3c2aQ61194 1686 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gpr52P0C5J4 361 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Crhr1P35347 415 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Milr1Q3TB92 246 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm2016Q3TQZ4 144 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Dusp23Q6NT99 150 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 H2-M2Q6W9L1 343 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Slc1a7Q8JZR4 559 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Efcab11Q9D0E5 162 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Bmp7P23359 430 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Txn2P97493 166 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 SobpQ0P5V2 864 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr381Q5SSP0 311 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Zer1Q80ZJ6 779 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 SynprQ8BGN8 265 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Elac1Q8VEB6 362 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Plpp3Q99JY8 312 aa11.32□□□□□ -0.6
Trim56-201ENSMUST00000054384 Bex4Q9CWT2 118 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 44.2 ms