RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	MIPOL1	Q8TD10	442 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	LRRC8C	Q8TDW0	803 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	C7orf26	Q96N11	449 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	CCDC115	Q96NT0	180 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	SDF2	Q99470	211 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	ZBTB18	Q99592	522 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	BTNL2	Q9UIR0	455 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	ZNF337	Q9Y3M9	751 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	NPIPA5	A0A0B4J1W7	369 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939		C9JVG2	144 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	NPIPA7	E9PJI5	369 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	DIAPH2	O60879	1101 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	AK1	P00568	194 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	PGR	P06401	933 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	NPIPA8	P0DM63	369 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	CTSS	P25774	331 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	DGKQ	P52824	942 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	ATP12A	P54707	1039 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	LRRC74A	Q0VAA2	488 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	CD226	Q15762	336 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	TMEM44	Q2T9K0	475 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	PDCD4	Q53EL6	469 aa	Known RBP	13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	KLHL26	Q53HC5	615 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	CHMP1B	Q7LBR1	199 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	MTERF4	Q7Z6M4	381 aa	Known RBP	13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	DMRTC2	Q8IXT2	367 aa	Predicted RBP	13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	UBQLNL	Q8IYU4	475 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	ZNF295-AS1	Q8N0V1	137 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	MEIOB	Q8N635	442 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	RELL2	Q8NC24	303 aa	Predicted RBP	13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	CHDH	Q8NE62	594 aa	Predicted RBP	13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	PHOSPHO1	Q8TCT1	267 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	WNT2B	Q93097	391 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	NEURL3	Q96EH8	262 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	ZFP3	Q96NJ6	502 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	OR52B2	Q96RD2	323 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	OR52E6	Q96RD3	313 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	TM9SF2	Q99805	663 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	EXD2	Q9NVH0	621 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	CLCF1	Q9UBD9	225 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	VDAC3	Q9Y277	283 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	USH1C	Q9Y6N9	552 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	CSMD2	Q7Z408	3487 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	SPG11	Q96JI7	2443 aa		13.58	□□□□□ -0.24
PHGDH-231	ENST00000641939	ANKRD17	O75179	2603 aa	Known RBP	13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	SHISA8	B8ZZ34	492 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	NPIPB9	F8W1W9	429 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939		H3BML4	177 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939		H3BNH8	94 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	UBD	O15205	165 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	HCRTR2	O43614	444 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	STX11	O75558	287 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	RCBTB2	O95199	551 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	AGR2	O95994	175 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	IL18BP	O95998	194 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	TMIGD3	P0DMS9	266 aa	Predicted RBP	13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	ZNF17	P17021	662 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	SSTR2	P30874	369 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	OPRM1	P35372	400 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	CHI3L1	P36222	383 aa	Predicted RBP	13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	ASCL1	P50553	236 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	EEFSEC	P57772	596 aa	Known RBP	13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	GSTA3	Q16772	222 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	ARHGAP11B	Q3KRB8	267 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	SAXO2	Q658L1	398 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	POMZP3	Q6PJE2	187 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	EPGN	Q6UW88	154 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	C16orf62	Q7Z3J2	963 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	GRAMD2A	Q8IUY3	354 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	TRIML2	Q8N7C3	387 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	B4GALNT2	Q8NHY0	566 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	DYDC1	Q8WWB3	177 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	C14orf79	Q96F83	325 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	LRRC46	Q96FV0	321 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	MARK4	Q96L34	752 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	PANX1	Q96RD7	426 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	SLC35A5	Q9BS91	424 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	NMUR2	Q9GZQ4	415 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	OR51I1	Q9H343	314 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	SLCO1B3	Q9NPD5	702 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	MED17	Q9NVC6	651 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	STOML1	Q9UBI4	398 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	DTNA	Q9Y4J8	743 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	AP4B1	Q9Y6B7	739 aa		13.57	□□□□□ -0.24
PHGDH-231	ENST00000641939	CCDC154	A6NI56	674 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	SYT5	O00445	386 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	SEC14L5	O43304	696 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	SLC22A3	O75751	556 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	IL6	P05231	212 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	OR12D1	P0DN82	309 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	ZNF41	P51814	821 aa	Predicted RBP	13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	SUCLG1	P53597	346 aa	Known RBP	13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	CASP9	P55211	416 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	CLDN15	P56746	228 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	CLDN20	P56880	219 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	PPP2R2A	P63151	447 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	ZNF117	Q03924	483 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	PLPPR5	Q32ZL2	321 aa		13.56	□□□□□ -0.24
PHGDH-231	ENST00000641939	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.56	□□□□□ -0.24

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