RNA–Protein interactions for RNA: ENST00000641321.1

CASC19-222, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,173 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-222	ENST00000641321	PAFAH1B3	Q15102	231 aa	Known RBP	4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	SEC23B	Q15437	767 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	NSDHL	Q15738	373 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	SNCB	Q16143	134 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	TMEM249	Q2WGJ8	235 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	ACSF3	Q4G176	576 aa	Predicted RBP	4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	SYTL3	Q4VX76	610 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	EEF1A1P5	Q5VTE0	462 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	SASS6	Q6UVJ0	657 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	KIAA0408	Q6ZU52	694 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	SPATA21	Q7Z572	469 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	RFX6	Q8HWS3	928 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	GRAMD2A	Q8IUY3	354 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	DENND6A	Q8IWF6	608 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	CDH26	Q8IXH8	852 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	PM20D2	Q8IYS1	436 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	CSNK1A1L	Q8N752	337 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	NIPA2	Q8N8Q9	360 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	LMNTD1	Q8N9Z9	388 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	OR2L8	Q8NGY9	312 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	SLC22A8	Q8TCC7	542 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	SLC5A11	Q8WWX8	675 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	HTRA1	Q92743	480 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	RERG	Q96A58	199 aa	Predicted RBP	4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	EFHD2	Q96C19	240 aa	Predicted RBP	4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	IMP4	Q96G21	291 aa	Known RBP	4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	C7orf34	Q96L11	122 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	ZFP3	Q96NJ6	502 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	QRFPR	Q96P65	431 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	FAM173A	Q9BQD7	235 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	RHNO1	Q9BSD3	238 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	MED18	Q9BUE0	208 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	ANGPTL4	Q9BY76	406 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	STK33	Q9BYT3	514 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	DEFB126	Q9BYW3	111 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	SLC25A51	Q9H1U9	297 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	SNTG1	Q9NSN8	517 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	GRHPR	Q9UBQ7	328 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	SLC39A10	Q9ULF5	831 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	KCNS2	Q9ULS6	477 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	USP22	Q9UPT9	525 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	CBY1	Q9Y3M2	126 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	LIPG	Q9Y5X9	500 aa		4.84	□□□□□ -1.63
CASC19-222	ENST00000641321	LOC105369274	A0A096LPK9	316 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321		A0A0A6YYC8	382 aa	Predicted RBP	4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	LOC102723532	A0A0G2JNH3	316 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321		A0A0U1RQK1	487 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	ZNF320	A2RRD8	509 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	AGAP14	A8MT82	685 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	ARHGEF33	A8MVX0	844 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	MAGEB17	A8MXT2	336 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	DEFB108A	A8MXU0	73 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	SLCO1B7	G3V0H7	640 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321		H0YGG7	62 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321		I3L1I5	382 aa	Predicted RBP	4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	SLC16A5	O15375	505 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	NIPSNAP2	O75323	286 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	ZNF189	O75820	626 aa	Predicted RBP	4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	GLS	O94925	669 aa	Predicted RBP	4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	NSA2	O95478	260 aa	Known RBP	4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	EPO	P01588	193 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	KRT14	P02533	472 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	FTH1	P02794	183 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	PKM	P14618	531 aa	Known RBP	4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	CHRNB2	P17787	502 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	ACADL	P28330	430 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	XCR1	P46094	333 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	SSR4	P51571	173 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	ALDH18A1	P54886	795 aa	Known RBP	4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	OR4D2	P58180	307 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	TIRAP	P58753	221 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	RPS16	P62249	146 aa	Known RBP	4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	VAMP2	P63027	116 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	ACTG1	P63261	375 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	CSNK2B	P67870	215 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.83	□□□□□ -1.64	5e-8	■■■■□ 22.2
CASC19-222	ENST00000641321	CYLC2	Q14093	348 aa	Predicted RBP	4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	ABRAXAS2	Q15018	415 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	SYT16	Q17RD7	645 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	ZNF750	Q32MQ0	723 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	ZNF658B	Q4V348	819 aa	Predicted RBP	4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	KLHDC7A	Q5VTJ3	777 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	NSUN5P2	Q63ZY6	315 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	CYB5R2	Q6BCY4	276 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	THOC7	Q6I9Y2	204 aa	Known RBP	4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	ERICH5	Q6P6B1	374 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	LRRC8B	Q6P9F7	803 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	AAGAB	Q6PD74	315 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	TTC23L	Q6PF05	361 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	SCIMP	Q6UWF3	145 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	MDGA2	Q7Z553	956 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	R3HCC1L	Q7Z5L2	792 aa	Known RBP	4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	LUZP1	Q86V48	1076 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	DCUN1D3	Q8IWE4	304 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	OR4N4	Q8N0Y3	316 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	TMEM251	Q8N6I4	163 aa		4.83	□□□□□ -1.64
CASC19-222	ENST00000641321	ZNF611	Q8N823	705 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms