RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	TRNT1	Q96Q11	434 aa	Known RBP	12.92	□□□□□ -0.34
SDHD-209	ENST00000640554	TM9SF2	Q99805	663 aa		12.92	□□□□□ -0.34
SDHD-209	ENST00000640554	RTN4R	Q9BZR6	473 aa		12.92	□□□□□ -0.34
SDHD-209	ENST00000640554	ZNF350	Q9GZX5	532 aa		12.92	□□□□□ -0.34
SDHD-209	ENST00000640554	SAP130	Q9H0E3	1048 aa		12.92	□□□□□ -0.34
SDHD-209	ENST00000640554	SLC24A3	Q9HC58	644 aa		12.92	□□□□□ -0.34
SDHD-209	ENST00000640554	ZNF629	Q9UEG4	869 aa	Predicted RBP	12.92	□□□□□ -0.34
SDHD-209	ENST00000640554	PRDM4	Q9UKN5	801 aa		12.92	□□□□□ -0.34
SDHD-209	ENST00000640554	AP4B1	Q9Y6B7	739 aa		12.92	□□□□□ -0.34
SDHD-209	ENST00000640554	KCNE3	Q9Y6H6	103 aa		12.92	□□□□□ -0.34
SDHD-209	ENST00000640554	ZNF407	Q9C0G0	2248 aa		12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	MBD3L4	A6NDZ8	208 aa	Predicted RBP	12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	MBD3L3	A6NE82	208 aa	Predicted RBP	12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	MBD3L5	A6NJ08	208 aa	Predicted RBP	12.91	□□□□□ -0.34
SDHD-209	ENST00000640554		H0Y3Z8	333 aa		12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	GTPBP1	O00178	669 aa	Known RBP	12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	ANP32D	O95626	131 aa		12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	ADH6	P28332	368 aa		12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	P2RX1	P51575	399 aa		12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	ZNF41	P51814	821 aa	Predicted RBP	12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	B3GALT5-AS1	P59052	145 aa		12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	RPS26	P62854	115 aa	Known RBP	12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	TMEM44	Q2T9K0	475 aa		12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	ADGRE4P	Q86SQ3	457 aa		12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	RPRML	Q8N4K4	120 aa		12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	WNT2B	Q93097	391 aa		12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	ROPN1L	Q96C74	230 aa		12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	LRRC46	Q96FV0	321 aa		12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	EBF4	Q9BQW3	602 aa		12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	RAD21L1	Q9H4I0	556 aa		12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	SERHL2	Q9H4I8	314 aa		12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	RPH3A	Q9Y2J0	694 aa	Predicted RBP	12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	WDR45	Q9Y484	360 aa		12.91	□□□□□ -0.34
SDHD-209	ENST00000640554	EML6	Q6ZMW3	1958 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	ICE1	Q9Y2F5	2266 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	UQCRHL	A0A096LP55	91 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554		A0A0G2JNJ9	132 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	OR2M5	A3KFT3	312 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554		B4DXG7	233 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	DVL2	O14641	736 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	HCRTR2	O43614	444 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	IL18BP	O95998	194 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	POU3F2	P20265	443 aa	Predicted RBP	12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	CLDN18	P56856	261 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	RPS3A	P61247	264 aa	Known RBP	12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	HPCA	P84074	193 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	GNA13	Q14344	377 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	SQLE	Q14534	574 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	DCST1	Q5T197	706 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	BLOC1S3	Q6QNY0	202 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	EIF3M	Q7L2H7	374 aa	Known RBP	12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	RNF130	Q86XS8	419 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	CCDC71	Q8IV32	467 aa	Predicted RBP	12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	CLEC4F	Q8N1N0	589 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	ZFP90	Q8TF47	636 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	MARK4	Q96L34	752 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	TRIB1	Q96RU8	372 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	SPOCK3	Q9BQ16	436 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	INPP5K	Q9BT40	448 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	MTHFD2L	Q9H903	347 aa	Predicted RBP	12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	PAQR5	Q9NXK6	330 aa	Predicted RBP	12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	CALML5	Q9NZT1	146 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554		Q9UFV3	132 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	SLC35A3	Q9Y2D2	325 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	ZNF337	Q9Y3M9	751 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	EXPH5	Q8NEV8	1989 aa		12.9	□□□□□ -0.34
SDHD-209	ENST00000640554	DNAJC13	O75165	2243 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	TMEM247	A6NEH6	219 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	SERINC4	A6NH21	518 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554		C9JVG2	144 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	HMGN4	O00479	90 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	ZNF264	O43296	627 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	FCMR	O60667	390 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	TNFRSF21	O75509	655 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	GSN	P06396	782 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	TROVE2	P10155	538 aa	Known RBP eCLIP	12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	PPIB	P23284	216 aa	Known RBP	12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	ME2	P23368	584 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	OPRM1	P35372	400 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	PEX19	P40855	299 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	STAR	P49675	285 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	RAC1	P63000	192 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	SRY	Q05066	204 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	GPR68	Q15743	365 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	CD226	Q15762	336 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	ZSWIM7	Q19AV6	140 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	TIGD2	Q4W5G0	525 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	C6orf10	Q5SRN2	563 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	OR2A2	Q6IF42	318 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	ARSK	Q6UWY0	536 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	LRRC74B	Q6ZQY2	392 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	CMIP	Q8IY22	773 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	ZNF619	Q8N2I2	560 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	GATS	Q8NAP1	163 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	OR9I1	Q8NGQ6	314 aa		12.89	□□□□□ -0.35
SDHD-209	ENST00000640554	OR5W2	Q8NH69	310 aa		12.89	□□□□□ -0.35

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