RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, human

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRIP-208	ENST00000639561	RP1	P56715	2156 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	NPIPA5	A0A0B4J1W7	369 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	NPIPA7	E9PJI5	369 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	TGFBR3L	H3BV60	316 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	PEX12	O00623	359 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	FOXS1	O43638	330 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	DXO	O77932	396 aa	Known RBP	12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	CBX7	O95931	251 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	NPIPA8	P0DM63	369 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	RPS4Y1	P22090	263 aa	Known RBP	12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	GRK5	P34947	590 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	RNF144A	P50876	292 aa	Predicted RBP	12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	ZNF136	P52737	540 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	CDK5	Q00535	292 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	ST3GAL3	Q11203	375 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	GINS1	Q14691	196 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	ZNF829	Q3KNS6	432 aa	Predicted RBP	12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	PLAG1	Q6DJT9	500 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	KLHL35	Q6PF15	583 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	ZNF730	Q6ZMV8	503 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	SLC46A3	Q7Z3Q1	461 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	OR8D4	Q8NGM9	314 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	OR5M11	Q96RB7	305 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	MCHR1	Q99705	422 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	DSN1	Q9H410	356 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	ARMC7	Q9H6L4	198 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	HCN3	Q9P1Z3	774 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	CORIN	Q9Y5Q5	1042 aa		12.84	□□□□□ -0.35
ATRIP-208	ENST00000639561	ASPM	Q8IZT6	3477 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	TLX3	O43711	291 aa	Predicted RBP	12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	ALOX5	P09917	674 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	PIP	P12273	146 aa	Predicted RBP	12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	GADD45A	P24522	165 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	OMP	P47874	163 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	PCYT1A	P49585	367 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	IGF2-AS	Q6U949	168 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	PLEKHM3	Q6ZWE6	761 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	GDF7	Q7Z4P5	450 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	SLC15A4	Q8N697	577 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	COX18	Q8N8Q8	333 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	CCDC74A	Q96AQ1	378 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	FAM46A	Q96IP4	442 aa	Known RBP	12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	SYNDIG1	Q9H7V2	258 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	SATB2	Q9UPW6	733 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	GXYLT2	A0PJZ3	443 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	EFCAB9	A8MZ26	197 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561		M0R3G1	203 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	AP3D1	O14617	1153 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	TLX2	O43763	284 aa	Predicted RBP	12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	KIAA0513	O60268	411 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	STX11	O75558	287 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	CDC123	O75794	336 aa	Predicted RBP	12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	THBS1	P07996	1170 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	PRG2	P13727	222 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	OPRL1	P41146	370 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	MLLT3	P42568	568 aa	Predicted RBP	12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	GFER	P55789	205 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	EFNB1	P98172	346 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	MAT1A	Q00266	395 aa	Known RBP	12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	ZNF91	Q05481	1191 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	LARS2	Q15031	903 aa	Known RBP	12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	MFSD4B	Q5TF39	518 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	FIGNL1	Q6PIW4	674 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	OGFOD3	Q6PK18	319 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	ZNF619	Q8N2I2	560 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	VWA5B2	Q8N398	1253 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	GPR151	Q8TDV0	419 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	TMEM255B	Q8WV15	326 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	NR4A3	Q92570	626 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	HSPBAP1	Q96EW2	488 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	SLC41A3	Q96GZ6	507 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	STAC	Q99469	402 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	POLDIP3	Q9BY77	421 aa	Known RBP	12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	SAP130	Q9H0E3	1048 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	ANKRD19P	Q9H560	264 aa		12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	TRIM45	Q9H8W5	580 aa	Predicted RBP	12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	ZBTB20	Q9HC78	741 aa	Predicted RBP	12.83	□□□□□ -0.36
ATRIP-208	ENST00000639561	CHD6	Q8TD26	2715 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	LILRA5	A6NI73	299 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561		J3QRK9	145 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	SLC35E2	P0CK97	266 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	DBT	P11182	482 aa	Known RBP	12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	PNLIP	P16233	465 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	PTN	P21246	168 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	GSTM3	P21266	225 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	GABRA4	P48169	554 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	PLAUR	Q03405	335 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	MAP4K2	Q12851	820 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	C14orf28	Q4W4Y0	310 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	SYT14P1	Q58G82	188 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	ARMCX4	Q5H9R4	360 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	ZAR1	Q86SH2	424 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	C17orf82	Q86X59	251 aa	Predicted RBP	12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	OR52R1	Q8NGF1	315 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	ACOT11	Q8WXI4	607 aa	Predicted RBP	12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	BORCS5	Q969J3	196 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561		Q96MT0	163 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	SLC38A3	Q99624	504 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	ZNF232	Q9UNY5	417 aa		12.82	□□□□□ -0.36
ATRIP-208	ENST00000639561	DMXL2	Q8TDJ6	3036 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms