RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 NANSQ9NR45 359 aa1.88□□□□□ -2.11
CCDC7-211ENST00000638889 MMP26Q9NRE1 261 aa1.88□□□□□ -2.11
CCDC7-211ENST00000638889 RIMS3Q9UJD0 308 aa1.88□□□□□ -2.11
CCDC7-211ENST00000638889 SMC3Q9UQE7 1217 aa1.88□□□□□ -2.11
CCDC7-211ENST00000638889 SLCO1B1Q9Y6L6 691 aa1.88□□□□□ -2.11
CCDC7-211ENST00000638889 TRBV6-6A0A0A6YYG2 114 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 SMIM28A0A1B0GU29 152 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 K7N7A8 449 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 CASKO14936 926 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 ADAM12O43184 909 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 ZNF264O43296 627 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 ZNF324O75467 553 aaPredicted RBP1.87□□□□□ -2.11
CCDC7-211ENST00000638889 XRCC1P18887 633 aaPredicted RBP1.87□□□□□ -2.11
CCDC7-211ENST00000638889 AQP1P29972 269 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 NTSP30990 170 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 GCKP35557 465 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 NOVA1P51513 510 aaKnown RBP1.87□□□□□ -2.11
CCDC7-211ENST00000638889 ACTN3Q08043 901 aaPredicted RBP1.87□□□□□ -2.11
CCDC7-211ENST00000638889 TFDP1Q14186 410 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 FAM220AQ7Z4H9 259 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 VPS36Q86VN1 386 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 LCA5Q86VQ0 697 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 CCNYQ8ND76 341 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 OR2T33Q8NG76 320 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 OR9A1PQ8NGU1 263 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 KRT35Q92764 455 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 ELMO2Q96JJ3 720 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 TMEM121Q9BTD3 319 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 WRAP53Q9BUR4 548 aaKnown RBP1.87□□□□□ -2.11
CCDC7-211ENST00000638889 TBC1D10AQ9BXI6 508 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 COMMD4Q9H0A8 199 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 COG4Q9H9E3 785 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 TRPV5Q9NQA5 729 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 DNPEPQ9ULA0 475 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 UBQLN1Q9UMX0 589 aaKnown RBP1.87□□□□□ -2.11
CCDC7-211ENST00000638889 EIF3LQ9Y262 564 aaKnown RBP1.87□□□□□ -2.11
CCDC7-211ENST00000638889 IFT52Q9Y366 437 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 USP16Q9Y5T5 823 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 CDH10Q9Y6N8 788 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 THSD7BQ9C0I4 1608 aa1.87□□□□□ -2.11
CCDC7-211ENST00000638889 PSMB11A5LHX3 300 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 FAM166BA8MTA8 275 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 NPIPB7O75200 414 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 CXCL10P02778 98 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 IGHV4-34P06331 123 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 BCKDHAP12694 445 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 AXLP30530 894 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 HPDP32754 393 aaPredicted RBP1.86□□□□□ -2.11
CCDC7-211ENST00000638889 APOC4P55056 127 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 EIF4EBP1Q13541 118 aaPredicted RBP1.86□□□□□ -2.11
CCDC7-211ENST00000638889 GPNMBQ14956 572 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 C1orf186Q6ZWK4 172 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 HSD11B1LQ7Z5J1 315 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 SKA3Q8IX90 412 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 TMEM252Q8N6L7 170 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 BLOC1S5Q8TDH9 187 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 TRUB1Q8WWH5 349 aaKnown RBP1.86□□□□□ -2.11
CCDC7-211ENST00000638889 MBOAT4Q96T53 435 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 CHRDL1Q9BU40 450 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 CHIAQ9BZP6 476 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 NARFLQ9H6Q4 476 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 ZDHHC11Q9H8X9 412 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 GPN2Q9H9Y4 310 aaPredicted RBP1.86□□□□□ -2.11
CCDC7-211ENST00000638889 SH2D2AQ9NP31 389 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 PAK1IP1Q9NWT1 392 aaPredicted RBP1.86□□□□□ -2.11
CCDC7-211ENST00000638889 ZNF223Q9UK11 482 aaPredicted RBP1.86□□□□□ -2.11
CCDC7-211ENST00000638889 SCML2Q9UQR0 700 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 MAB21L2Q9Y586 359 aa1.86□□□□□ -2.11
CCDC7-211ENST00000638889 LOC100131303A0A0U1RQF7 123 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 PNPP00491 289 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 GSTT2P0CG29 244 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 GSTT2BP0CG30 244 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 RCC1P18754 421 aaPredicted RBP1.85□□□□□ -2.11
CCDC7-211ENST00000638889 PRDX6P30041 224 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 PRDX2P32119 198 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 COPB2P35606 906 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 GNPDA1P46926 289 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 FUT7Q11130 342 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 ST3GAL3Q11203 375 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 NEIL3Q8TAT5 605 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 IL1F10Q8WWZ1 152 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 OR1E3Q8WZA6 343 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 CABS1Q96KC9 395 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 ARHGDIGQ99819 225 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 RNF126Q9BV68 326 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 NFKBIZQ9BYH8 718 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 SRXN1Q9BYN0 137 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 UTP6Q9NYH9 597 aaKnown RBP1.85□□□□□ -2.11
CCDC7-211ENST00000638889 CNOT2Q9NZN8 540 aaKnown RBP1.85□□□□□ -2.11
CCDC7-211ENST00000638889 P2RX2Q9UBL9 471 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 KCNN3Q9UGI6 736 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 DCDC2Q9UHG0 476 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 APPL1Q9UKG1 709 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 PLA2G4CQ9UP65 541 aa1.85□□□□□ -2.11
CCDC7-211ENST00000638889 STRAPQ9Y3F4 350 aaKnown RBP1.85□□□□□ -2.11
CCDC7-211ENST00000638889 A6NDX4 124 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 A8MUA0 341 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 ZNF705EA8MWA4 302 aaPredicted RBP1.84□□□□□ -2.11
CCDC7-211ENST00000638889 ICOSLGO75144 302 aa1.84□□□□□ -2.11
CCDC7-211ENST00000638889 AKR7A3O95154 331 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms