RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 MAGIXQ9H6Y5 334 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 ZNF703Q9H7S9 590 aaPredicted RBP11.55□□□□□ -0.56
CTSD-208ENST00000636843 ACKR4Q9NPB9 350 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 ALKBH4Q9NXW9 302 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 ATP6V1HQ9UI12 483 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 CORO2BQ9UQ03 480 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 GMEB1Q9Y692 573 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 NUP214P35658 2090 aaPredicted RBP11.55□□□□□ -0.56
CTSD-208ENST00000636843 RNF103-CHMP3A0A140T963 221 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 GNG14A0A1W2PPG7 69 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 FAM221AA4D161 298 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 SAC3D1A6NKF1 404 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 VGLL3A8MV65 326 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 SOCS2O14508 198 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 CLOCKO15516 846 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 SH3BGRLO75368 114 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 FAM58BPP0C7Q3 252 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 ENDOUP21128 410 aaKnown RBP11.55□□□□□ -0.56
CTSD-208ENST00000636843 PTX3P26022 381 aaPredicted RBP11.55□□□□□ -0.56
CTSD-208ENST00000636843 CDKN2CP42773 168 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 ERICH5Q6P6B1 374 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 SLC29A4Q7RTT9 530 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 WDR53Q7Z5U6 358 aaPredicted RBP11.55□□□□□ -0.56
CTSD-208ENST00000636843 EPHX4Q8IUS5 362 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 LRRC25Q8N386 305 aaPredicted RBP11.55□□□□□ -0.56
CTSD-208ENST00000636843 METTL4Q8N3J2 472 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 ZCCHC7Q8N3Z6 543 aaKnown RBP11.55□□□□□ -0.56
CTSD-208ENST00000636843 CBR4Q8N4T8 237 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 NEIL3Q8TAT5 605 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 CNBD2Q96M20 576 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 MYCBPQ99417 103 aaPredicted RBP11.55□□□□□ -0.56
CTSD-208ENST00000636843 CNPPD1Q9BV87 410 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 BHLHE41Q9C0J9 482 aaPredicted RBP11.55□□□□□ -0.56
CTSD-208ENST00000636843 FAM192AQ9GZU8 254 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 SLC6A13Q9NSD5 602 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 DCAF13Q9NV06 445 aaKnown RBP11.55□□□□□ -0.56
CTSD-208ENST00000636843 ATAD3AQ9NVI7 634 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 DNAJB12Q9NXW2 375 aaKnown RBP11.55□□□□□ -0.56
CTSD-208ENST00000636843 AHSPQ9NZD4 102 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 SPRR3Q9UBC9 169 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 ZNF639Q9UID6 485 aa11.55□□□□□ -0.56
CTSD-208ENST00000636843 EML6Q6ZMW3 1958 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 OR6C76A6NM76 312 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 HSPB2A8KAH6 182 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 CLIC1O00299 241 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 SAP18O00422 153 aaKnown RBP11.54□□□□□ -0.56
CTSD-208ENST00000636843 RNASET2O00584 256 aaKnown RBP11.54□□□□□ -0.56
CTSD-208ENST00000636843 CTAG2O75638 210 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 PRSS23O95084 383 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 GSNP06396 782 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 FBXO45P0C2W1 286 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 RFPL3SP0C7P2 107 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 GPX2P18283 190 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 GALNSP34059 522 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 BUD31P41223 144 aaPredicted RBP11.54□□□□□ -0.56
CTSD-208ENST00000636843 IST1P53990 364 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 TNFRSF17Q02223 184 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 HSPB2Q16082 182 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 NHSL2Q5HYW2 709 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 C18orf63Q68DL7 685 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 DGAT2L6Q6ZPD8 337 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 COMMD6Q7Z4G1 85 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 CARM1Q86X55 608 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 CDC26Q8NHZ8 85 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 MTERF3Q96E29 417 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 FOXC2Q99958 501 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 SORBS1Q9BX66 1292 aaKnown RBP11.54□□□□□ -0.56
CTSD-208ENST00000636843 ANKRD60Q9BZ19 345 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 CXXC4Q9H2H0 198 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 REEP4Q9H6H4 257 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 ZNF696Q9H7X3 374 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 PROK2Q9HC23 129 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 MYNNQ9NPC7 610 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 UBAP1Q9NZ09 502 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 OAZ3Q9UMX2 235 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 EDARQ9UNE0 448 aa11.54□□□□□ -0.56
CTSD-208ENST00000636843 CHCHD2Q9Y6H1 151 aaPredicted RBP11.54□□□□□ -0.56
CTSD-208ENST00000636843 ITPR3Q14573 2671 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 ANKRD33BA6NCL7 494 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 LRRC3CA6NJW4 275 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 HRKO00198 91 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 SYT5O00445 386 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 PLPP1O14494 284 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 ACOX3O15254 700 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 PROM1O43490 865 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 OR10H2O60403 315 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 SEMA3DO95025 777 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 GPR75O95800 540 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 LAMP1P11279 417 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 KIR2DL3P43628 341 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 SLC37A1P57057 533 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 ZNF267Q14586 743 aaPredicted RBP11.53□□□□□ -0.56
CTSD-208ENST00000636843 NTRK2Q16620 822 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 PRAMEF20Q5VT98 475 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 MRM1Q6IN84 353 aaKnown RBP11.53□□□□□ -0.56
CTSD-208ENST00000636843 ZNF621Q6ZSS3 439 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 IKBIPQ70UQ0 350 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 ZZZ3Q8IYH5 903 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 TAGAPQ8N103 731 aa11.53□□□□□ -0.56
CTSD-208ENST00000636843 CHDHQ8NE62 594 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms