RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 MOAP1Q96BY2 351 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 UTP23Q9BRU9 249 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 CHRDQ9H2X0 955 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 TRGV8A0A0C4DH27 118 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 A0A1W2PPV4 95 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 HTRA2O43464 458 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 SLC19A2O60779 497 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 DNAJB1P25685 340 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 PLEKHN1Q494U1 663 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 INTS12Q96CB8 462 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 RPS10P5Q9NQ39 176 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 PHLPP1O60346 1717 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 GOLGA4Q13439 2230 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 ZNF816-ZNF321PA0A0X1KG74 233 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 SCAMP2O15127 329 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 APOC3P02656 99 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 F13BP05160 661 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 UCHL1P09936 223 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 AKR1C1Q04828 323 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 FAM26DQ5JW98 314 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 TMEM150AQ86TG1 271 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 ZNF321PQ8N8H1 164 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 SMG8Q8ND04 991 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 TMEM45AQ9NWC5 275 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 MYOTQ9UBF9 498 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 SNHG28P0DPA3 235 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 HLA-FP30511 346 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 SOX4Q06945 474 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 IGHV3-20A0A0C4DH32 117 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 ZNF840PA6NDX5 716 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 NIPAL1Q6NVV3 410 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 ZNF704Q6ZNC4 412 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 TEX10Q9NXF1 929 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 UBQLN2Q9UHD9 624 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 NCR1O76036 304 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 MT-CO2P00403 227 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 RFC3P40938 356 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 ABHD18Q0P651 414 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 SIRT6Q8N6T7 355 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 GRPEL2Q8TAA5 225 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 LMO7Q8WWI1 1683 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 PIPP12273 146 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 PTPRRQ15256 657 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 NANOGP8Q6NSW7 305 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 FAIMQ9NVQ4 179 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 PCDHGA7Q9Y5G6 932 aa16.81■□□□□ 0.28
CACNA1A-227ENST00000636549 RPP30P78346 268 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 UGT3A2Q3SY77 523 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 PLAC9Q5JTB6 97 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 OR52E8Q6IFG1 317 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 SLC46A3Q7Z3Q1 461 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 TP53INP2Q8IXH6 220 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 OR52E1Q8NGJ3 308 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 RAB7BQ96AH8 199 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 MAELQ96JY0 434 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 MRGPRX2Q96LB1 330 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 NECTIN4Q96NY8 510 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 MRI1Q9BV20 369 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 C12orf71A8MTZ7 269 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 M0R1B8 84 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 HS3ST1O14792 307 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 HOXB5P09067 269 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 JAG1P78504 1218 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 COX15Q7KZN9 410 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 WFDC8Q8IUA0 241 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 C9orf43Q8TAL5 461 aaPredicted RBP16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 LANCL2Q9NS86 450 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 NOTOA8MTQ0 251 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 SNAPC5O75971 98 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 DNASE1P24855 282 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 ADH6P28332 368 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 OR1D5P58170 312 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 GPR85P60893 370 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 SLC25A11Q02978 314 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 GPR50Q13585 617 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 TMEM176BQ3YBM2 270 aaPredicted RBP16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 MISPQ8IVT2 679 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 MRPL41Q8IXM3 137 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 NATD1Q8N6N6 113 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 PSMF1Q92530 271 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 GIMAP5Q96F15 307 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 BOLA2-SMG1P6H3BVE0 249 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 HEXAP06865 529 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 PCLAFQ15004 111 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 AADACL3Q5VUY0 350 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 KIAA1191Q96A73 305 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 TMEM19Q96HH6 336 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 NKX1-2Q9UD57 310 aaPredicted RBP16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 NUMBLQ9Y6R0 609 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 PRSS38A1L453 326 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 TMEM185AQ8NFB2 350 aa16.8■□□□□ 0.28
CACNA1A-227ENST00000636549 PRAMEF26H0Y7S4 382 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 GSRP00390 522 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 ALDOAP04075 364 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 HOXB6P17509 224 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 RPL35P42766 123 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 TMBIM6P55061 237 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 OR11L1Q8NGX0 322 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 ATG12O94817 140 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 RAB6CQ53S08 254 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms