RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 LGALS8O00214 317 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 SLC37A4O43826 429 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF217O75362 1048 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 ITGB2P05107 769 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 MYCLP1P12525 358 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 GJA5P36382 358 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 TGFBR1P36897 503 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 PTH2RP49190 550 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 ELF3P78545 371 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 ACY1Q03154 408 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 NPRL3Q12980 569 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 MANEALQ5VSG8 457 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 YRDCQ86U90 279 aaKnown RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 MKXQ8IYA7 352 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 SLC30A7Q8NEW0 376 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 OR4E2Q8NGC2 313 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 IGDCC4Q8TDY8 1250 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 ZDHHC1Q8WTX9 485 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 FAM84AQ96KN4 292 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF582Q96NG8 517 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF587Q96SQ5 575 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 NMNAT2Q9BZQ4 307 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 MVB12BQ9H7P6 319 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 GNG12Q9UBI6 72 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 FBXL17Q9UF56 701 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 LSM5Q9Y4Y9 91 aaKnown RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 FRMPD1Q5SYB0 1578 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 TRBC2A0A5B9 178 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 SLC9B1P1A6NJY1 282 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 TULP2O00295 520 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 EEF1E1O43324 174 aaKnown RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 ADAM23O75077 832 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 RAD52P43351 418 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 PSMB3P49720 205 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 MFGE8Q08431 387 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 POU4F3Q15319 338 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 UNC50Q53HI1 259 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 LRRC73Q5JTD7 316 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 LRRC25Q8N386 305 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 RIMS4Q9H426 269 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 RDH14Q9HBH5 336 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 SLC2A6Q9UGQ3 507 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 COPS3Q9UNS2 423 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 CEPT1Q9Y6K0 416 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 PLA2R1Q13018 1463 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 NAP1L6A6NFF2 107 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 RNASET2O00584 256 aaKnown RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 LILRB3O75022 631 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 DNAJB5O75953 348 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 FBP1P09467 338 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 TIGITQ495A1 244 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 LRRC28Q86X40 367 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 SPARTQ8N0X7 666 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 PGBD5Q8N414 524 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 OR6F1Q8NGZ6 308 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 UHRF1Q96T88 793 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 LPAR4Q99677 370 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 ELOVL3Q9HB03 270 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 EIF2B3Q9NR50 452 aaKnown RBP5.71□□□□□ -1.5
SCN1A-212ENST00000636194 TCFL5Q9UL49 500 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 PADI1Q9ULC6 663 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 SLC22A7Q9Y694 548 aa5.71□□□□□ -1.5
SCN1A-212ENST00000636194 ANKUB1A6NFN9 424 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 C5orf52A6NGY3 159 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 CDRT15L2A8MXV6 281 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 GOSR2O14653 212 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 UGT1A9O60656 530 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 CHRNA1P02708 482 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 AMY2AP04746 511 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 RD3LP0DJH9 198 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 ATP1B2P14415 290 aaPredicted RBP5.7□□□□□ -1.5
SCN1A-212ENST00000636194 DGKZQ13574 1117 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 VRK2Q86Y07 508 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 AQP12AQ8IXF9 295 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF679Q8IYX0 411 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 BARD1Q99728 777 aaKnown RBP5.7□□□□□ -1.5
SCN1A-212ENST00000636194 MIEN1Q9BRT3 115 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 ZCCHC4Q9H5U6 513 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 UGT1A7Q9HAW7 530 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 UGT1A10Q9HAW8 530 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 UGT1A8Q9HAW9 530 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 LRRC42Q9Y546 428 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 ZFP37Q9Y6Q3 630 aaPredicted RBP5.7□□□□□ -1.5
SCN1A-212ENST00000636194 SHANK1Q9Y566 2161 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 SPINT2O43291 252 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 NOBOXO60393 691 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 G6PDP11413 515 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 ADCYAP1R1P41586 468 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 RANP62826 216 aaKnown RBP5.7□□□□□ -1.5
SCN1A-212ENST00000636194 GPR50Q13585 617 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 PON2Q15165 354 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 TSTQ16762 297 aaKnown RBP5.7□□□□□ -1.5
SCN1A-212ENST00000636194 TSSK4Q6SA08 328 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 CATSPERDQ86XM0 798 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 OR10X1Q8NGY0 326 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 IL31RAQ8NI17 732 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 FIBINQ8TAL6 211 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 SOX7Q9BT81 388 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 REEP4Q9H6H4 257 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 SPACA1Q9HBV2 294 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms