RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 INHBBP09529 407 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 GPR4P46093 362 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 PGDP52209 483 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 ATP12AP54707 1039 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 OCA2Q04671 838 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 DSG2Q14126 1118 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 TMEM44Q2T9K0 475 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 ARMCX4Q5H9R4 360 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 PMS2CLQ68D20 193 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 KANSL1Q7Z3B3 1105 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 TMEM239Q8WW34 195 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 LGALS12Q96DT0 336 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 LRR1Q96L50 414 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 PTCHD1Q96NR3 888 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 DUSP23Q9BVJ7 150 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 TRIM2Q9C040 744 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 SERTAD3Q9UJW9 196 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 CBLCQ9ULV8 474 aa20.4■□□□□ 0.86
PNKP-220ENST00000627232 OR2W5A6NFC9 320 aa20.39■□□□□ 0.85
PNKP-220ENST00000627232 DSCR3O14972 297 aa20.39■□□□□ 0.85
PNKP-220ENST00000627232 TOX3O15405 576 aaPredicted RBP20.39■□□□□ 0.85
PNKP-220ENST00000627232 PRODHO43272 600 aa20.39■□□□□ 0.85
PNKP-220ENST00000627232 ADRA2AP08913 450 aa20.39■□□□□ 0.85
PNKP-220ENST00000627232 EPHA8P29322 1005 aaPredicted RBP20.39■□□□□ 0.85
PNKP-220ENST00000627232 RFX3P48380 749 aa20.39■□□□□ 0.85
PNKP-220ENST00000627232 ENTPD1P49961 510 aa20.39■□□□□ 0.85
PNKP-220ENST00000627232 VBP1P61758 197 aa20.39■□□□□ 0.85
PNKP-220ENST00000627232 DGUOKQ16854 277 aa20.39■□□□□ 0.85
PNKP-220ENST00000627232 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.39■□□□□ 0.85
PNKP-220ENST00000627232 KLHL22Q53GT1 634 aa20.39■□□□□ 0.85
PNKP-220ENST00000627232 TSSK4Q6SA08 328 aa20.39■□□□□ 0.85
PNKP-220ENST00000627232 ZNF550Q7Z398 422 aa20.39■□□□□ 0.85
PNKP-220ENST00000627232 CROCCP3Q8IVE0 287 aa20.39■□□□□ 0.85
PNKP-220ENST00000627232 BRIX1Q8TDN6 353 aaKnown RBP20.39■□□□□ 0.85
PNKP-220ENST00000627232 NDC1Q9BTX1 674 aa20.39■□□□□ 0.85
PNKP-220ENST00000627232 ZNF768Q9H5H4 540 aaKnown RBP20.39■□□□□ 0.85
PNKP-220ENST00000627232 DNAJB12Q9NXW2 375 aaKnown RBP20.39■□□□□ 0.85
PNKP-220ENST00000627232 MUTYHQ9UIF7 546 aa20.39■□□□□ 0.85
PNKP-220ENST00000627232 DIMT1Q9UNQ2 313 aaKnown RBP20.39■□□□□ 0.85
PNKP-220ENST00000627232 COL5A1P20908 1838 aaPredicted RBP20.39■□□□□ 0.85
PNKP-220ENST00000627232 EYSQ5T1H1 3165 aa20.39■□□□□ 0.85
PNKP-220ENST00000627232 IGKV3D-11A0A0A0MRZ8 115 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 A0A0B4J2E0 115 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 A0A1B0GX12 115 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 UNC119BA6NIH7 251 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 EFCAB9A8MZ26 197 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 C17orf105B2RV13 164 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 KDM4EB2RXH2 506 aaPredicted RBP20.38■□□□□ 0.85
PNKP-220ENST00000627232 CHP2O43745 196 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 AIREO43918 545 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 HMGN1P05114 100 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 FOLR1P15328 257 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 ALAS2P22557 587 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 UGT2B10P36537 528 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 OR1D4P47884 311 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 SQSTM1Q13501 440 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 SNAP47Q5SQN1 464 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 WDR88Q6ZMY6 472 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 BCORP1Q8N888 145 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 NDNFQ8TB73 568 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 DYNC2LI1Q8TCX1 351 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 CCDC74AQ96AQ1 378 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 YIPF2Q9BWQ6 316 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 PRMT8Q9NR22 394 aaPredicted RBP20.38■□□□□ 0.85
PNKP-220ENST00000627232 ERGIC3Q9Y282 383 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 OR10H1Q9Y4A9 318 aa20.38■□□□□ 0.85
PNKP-220ENST00000627232 DYRK3O43781 588 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 RPLP0P05388 317 aaKnown RBP20.37■□□□□ 0.85
PNKP-220ENST00000627232 TDGF1P13385 188 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 FBLP22087 321 aaKnown RBP20.37■□□□□ 0.85
PNKP-220ENST00000627232 ACAA2P42765 397 aaKnown RBP20.37■□□□□ 0.85
PNKP-220ENST00000627232 SERPINB10P48595 397 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 RGS6P49758 472 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 CTBP2P56545 445 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 PGGHGQ32M88 737 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 RPL13AP3Q6NVV1 102 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 TMPRSS11FQ6ZWK6 438 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 BCDIN3DQ7Z5W3 292 aaKnown RBP20.37■□□□□ 0.85
PNKP-220ENST00000627232 CDK20Q8IZL9 346 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 ZNF614Q8N883 585 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 LSMEM1Q8N8F7 131 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 OR4Q3Q8NH05 313 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 PTPMT1Q8WUK0 201 aaPredicted RBP20.37■□□□□ 0.85
PNKP-220ENST00000627232 MGLLQ99685 303 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 MND1Q9BWT6 205 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 ZNF304Q9HCX3 659 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 TAS2R16Q9NYV7 291 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 CFL2Q9Y281 166 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 LSM2Q9Y333 95 aaKnown RBP20.37■□□□□ 0.85
PNKP-220ENST00000627232 MED31Q9Y3C7 131 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 A0A1B0GTQ1 180 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 RAB36O95755 333 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 RBM34P42696 430 aaKnown RBP20.37■□□□□ 0.85
PNKP-220ENST00000627232 CLK1P49759 484 aaKnown RBP20.37■□□□□ 0.85
PNKP-220ENST00000627232 NCS1P62166 190 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 LSM3P62310 102 aaKnown RBP20.37■□□□□ 0.85
PNKP-220ENST00000627232 TUBA1BP68363 451 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.37■□□□□ 0.85
PNKP-220ENST00000627232 MED22Q15528 200 aa20.37■□□□□ 0.85
PNKP-220ENST00000627232 ZNF829Q3KNS6 432 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms