RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 TM9SF4Q92544 642 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 SLC9A6Q92581 669 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TMCO6Q96DC7 493 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 ZC3HAV1LQ96H79 300 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 DIRAS2Q96HU8 199 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 ACTRT3Q9BYD9 372 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 PILRAQ9UKJ1 303 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 FANCMQ8IYD8 2048 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TBC1D3DA0A087WVF3 549 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TBC1D3IA0A087WXS9 549 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TBC1D3EA0A087X179 549 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TBC1D3KA0A087X1G2 549 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TRDV1A0A1B0GX56 115 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TBC1D3FA6NER0 549 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TBC1D3LB9A6J9 549 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 SMPD2O60906 423 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TBC1D3HP0C7X1 549 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 THEGLP0DJG4 465 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 NR2F6P10588 404 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 HOXB3P14651 431 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 COL9A1P20849 921 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 RPS7P62081 194 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 HOXC5Q00444 222 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 LRRC32Q14392 662 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 GINS1Q14691 196 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TRAM2Q15035 370 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 PYDC2Q56P42 97 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 AGAP6Q5VW22 663 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TBC1D3GQ6DHY5 549 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TBC1D3CQ6IPX1 549 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 ZNF730Q6ZMV8 503 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 C16orf62Q7Z3J2 963 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TBC1D3Q8IZP1 549 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 Q8N9G6 341 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 OR14C36Q8NHC7 312 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 BRIX1Q8TDN6 353 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 KAT2AQ92830 837 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 AGAP4Q96P64 663 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TIMP4Q99727 224 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 SEMA4GQ9NTN9 838 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 POU2F3Q9UKI9 436 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 SATB2Q9UPW6 733 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 CARD8Q9Y2G2 431 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 GPR55Q9Y2T6 319 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 SLC31A1O15431 190 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 FMO6PO60774 539 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 CSF2P04141 144 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 FAM157BP0CG42 384 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TRHRP34981 398 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 RPS5P46782 204 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TGM4P49221 684 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 ZNF136P52737 540 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 RPS15AP62244 130 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 LSM11P83369 360 aaKnown RBP eCLIP6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 PRR5P85299 388 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 MAP4K2Q12851 820 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 DUSP8Q13202 625 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 MBOAT2Q6ZWT7 520 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 NRROSQ86YC3 692 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 SLC7A5P1Q8MH63 180 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 ARHGEF39Q8N4T4 335 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 SCAIQ8N9R8 606 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 OR8K5Q8NH50 307 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 OR52N1Q8NH53 320 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TEX47Q8TBZ9 253 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 EDAQ92838 391 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 LRR1Q96L50 414 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 TEX12Q9BXU0 123 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 ANKRA2Q9H9E1 313 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 COMMD3Q9UBI1 195 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 SNX7Q9UNH6 387 aa6.68□□□□□ -1.34
CTNNA1-244ENST00000627109 CPSF4LA6NMK7 179 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 OR52A4PA6NMU1 304 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 TNFRSF10AO00220 468 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 BRINP1O60477 761 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 PAHP00439 452 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 JMJD7P0C870 316 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 CSNK2A2P19784 350 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 IFNGR2P38484 337 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 HTR3AP46098 478 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 OR2B6P58173 313 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 TNFRSF17Q02223 184 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 ZNF750Q32MQ0 723 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 C6orf183Q5T699 404 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 C22orf42Q6IC83 251 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 MFSD12Q6NUT3 480 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 SLC27A4Q6P1M0 643 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 XKRXQ6PP77 449 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 PAQR6Q6TCH4 344 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 METAP1DQ6UB28 335 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 USP53Q70EK8 1073 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 RDH10Q8IZV5 341 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 HDDC3Q8N4P3 179 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 ACOT11Q8WXI4 607 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 MS4A4EQ96PG1 132 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 PRSS27Q9BQR3 290 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 APOOQ9BUR5 198 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 ZNF350Q9GZX5 532 aa6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 MOV10Q9HCE1 1003 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-244ENST00000627109 SRA1Q9HD15 236 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms