RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ZNF264O43296 627 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 HCRTR2O43614 444 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 ZG16O60844 167 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 WISP2O76076 250 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 NR2F1P10589 423 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 UBL4AP11441 157 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 BMP7P18075 431 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 HK1P19367 917 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 ME2P23368 584 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 ADH6P28332 368 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 CDKN2CP42773 168 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 ZFP36L2P47974 494 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 P2RX1P51575 399 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 CRISP3P54108 245 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 GFRA1P56159 465 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 EEF1A1P68104 462 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 GPAT3Q53EU6 434 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 EMC4Q5J8M3 183 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 EEF1A1P5Q5VTE0 462 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 PRAMEF8Q5VWM4 474 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 PRAMEF7Q5VXH5 474 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 RAET1LQ5VY80 246 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 OR5M10Q6IEU7 315 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 DNAJC14Q6Y2X3 702 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 LRRC74BQ6ZQY2 392 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 EIF3MQ7L2H7 374 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 CHMP1BQ7LBR1 199 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 FUNDC1Q8IVP5 155 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 ULK2Q8IYT8 1036 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 MEIOBQ8N635 442 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 ZFP3Q96NJ6 502 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 UGT2B28Q9BY64 529 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 SERHL2Q9H4I8 314 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 ARMC7Q9H6L4 198 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 MTHFD2LQ9H903 347 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 PAQR5Q9NXK6 330 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 FLRT3Q9NZU0 649 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 MED11Q9P086 117 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 NDUFAF1Q9Y375 327 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 AP4B1Q9Y6B7 739 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 PTPN13Q12923 2485 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 PHF3Q92576 2039 aaKnown RBP12.71□□□□□ -0.38
SNRPA1-216ENST00000626000 SPTAN1Q13813 2472 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 SERINC4A6NH21 518 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 CD8B2A6NJW9 211 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 BBIP1A8MTZ0 92 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 H0Y3Z8 333 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 CLIC1O00299 241 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 ADAM10O14672 748 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 NPPAP01160 153 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 GSNP06396 782 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 SNRPB2P08579 225 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 UQCRBP14927 111 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 ELK4P28324 431 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 CHRNB4P30926 498 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 CRATP43155 626 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 SLC6A8P48029 635 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 DSTNP60981 165 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 CBFBQ13951 182 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 GPR68Q15743 365 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 COQ5Q5HYK3 327 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 RIPPLY2Q5TAB7 128 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 APOOLQ6UXV4 268 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 GALNT10Q86SR1 603 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 PEX5LQ8IYB4 626 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 CLEC4FQ8N1N0 589 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 DPP10Q8N608 796 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 ZNF614Q8N883 585 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 OR5M9Q8NGP3 310 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 ITLN2Q8WWU7 325 aaPredicted RBP12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 TMEM234Q8WY98 164 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 RAB8BQ92930 207 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 THOC1Q96FV9 657 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 PAIP1Q9H074 479 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 ZNF385DQ9H6B1 395 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 CALHM2Q9HA72 323 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 CHST11Q9NPF2 352 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 CAMK2AQ9UQM7 478 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 SLC6A5Q9Y345 797 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 GPC6Q9Y625 555 aaPredicted RBP12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 KCNE3Q9Y6H6 103 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 FREM3P0C091 2139 aa12.7□□□□□ -0.38
SNRPA1-216ENST00000626000 USP9YO00507 2555 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 GJE1A6NN92 205 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 HSPB2A8KAH6 182 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 ZIC3O60481 467 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 CCDC22O60826 627 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 NUDT14O95848 222 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 EPPINO95925 133 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 CSTAP01040 98 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 DBIP07108 87 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 BMP2P12643 396 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 GP1BBP13224 206 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 ZNF708P17019 499 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 POU3F2P20265 443 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 CAPN3P20807 821 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 TIMP3P35625 211 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 RPS3AP61247 264 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 HSPB2Q16082 182 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms