RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 CDC20BQ86Y33 519 aa9.76□□□□□ -0.85
SSBP4-215ENST00000625926 WDR75Q8IWA0 830 aaKnown RBP9.76□□□□□ -0.85
SSBP4-215ENST00000625926 GTPBP8Q8N3Z3 284 aaPredicted RBP9.76□□□□□ -0.85
SSBP4-215ENST00000625926 METTL25Q8N6Q8 603 aa9.76□□□□□ -0.85
SSBP4-215ENST00000625926 CNEP1R1Q8N9A8 125 aa9.76□□□□□ -0.85
SSBP4-215ENST00000625926 B4GALNT2Q8NHY0 566 aa9.76□□□□□ -0.85
SSBP4-215ENST00000625926 FNDC9Q8TBE3 224 aa9.76□□□□□ -0.85
SSBP4-215ENST00000625926 SFXN5Q8TD22 340 aa9.76□□□□□ -0.85
SSBP4-215ENST00000625926 NINJ1Q92982 152 aa9.76□□□□□ -0.85
SSBP4-215ENST00000625926 STARD4Q96DR4 205 aa9.76□□□□□ -0.85
SSBP4-215ENST00000625926 SH3YL1Q96HL8 342 aaPredicted RBP9.76□□□□□ -0.85
SSBP4-215ENST00000625926 ZNF845Q96IR2 970 aaPredicted RBP9.76□□□□□ -0.85
SSBP4-215ENST00000625926 DACH2Q96NX9 599 aa9.76□□□□□ -0.85
SSBP4-215ENST00000625926 C20orf27Q9GZN8 174 aa9.76□□□□□ -0.85
SSBP4-215ENST00000625926 RNF122Q9H9V4 155 aa9.76□□□□□ -0.85
SSBP4-215ENST00000625926 MED17Q9NVC6 651 aa9.76□□□□□ -0.85
SSBP4-215ENST00000625926 GPATCH2Q9NW75 528 aa9.76□□□□□ -0.85
SSBP4-215ENST00000625926 PDZD2O15018 2839 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 C7orf72A4D263 438 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 DUXAA6NLW8 204 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 H3BNH8 94 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 EIF1AYO14602 144 aaKnown RBP9.75□□□□□ -0.85
SSBP4-215ENST00000625926 CASKO14936 926 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 SMNDC1O75940 238 aaKnown RBP eCLIP9.75□□□□□ -0.855e-8■■■■■ 35.7
SSBP4-215ENST00000625926 GOSR1O95249 250 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 FCGR2AP12318 317 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 CD1EP15812 388 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 BGNP21810 368 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 CPOXP36551 454 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 KIR2DL2P43627 348 aaPredicted RBP9.75□□□□□ -0.85
SSBP4-215ENST00000625926 EIF1AXP47813 144 aaKnown RBP9.75□□□□□ -0.85
SSBP4-215ENST00000625926 PCYT1AP49585 367 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 ART1P52961 327 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 IST1P53990 364 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 RAC1P63000 192 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 HBA1P69905 142 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 FGFBP1Q14512 234 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 CD226Q15762 336 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 KLHL26Q53HC5 615 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 DCST2Q5T1A1 773 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 C6orf120Q7Z4R8 191 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 BTLAQ7Z6A9 289 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 MTERF4Q7Z6M4 381 aaKnown RBP9.75□□□□□ -0.85
SSBP4-215ENST00000625926 GGNQ86UU5 652 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 LRRC34Q8IZ02 419 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 ZNF527Q8NB42 609 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 VPS37AQ8NEZ2 397 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 OR5AK3PQ8NH89 298 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 PHOSPHO1Q8TCT1 267 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 ZBTB9Q96C00 473 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 SORT1Q99523 831 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 PAIP2Q9BPZ3 127 aaKnown RBP9.75□□□□□ -0.85
SSBP4-215ENST00000625926 PRRG4Q9BZD6 226 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 DPY30Q9C005 99 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 PAQR5Q9NXK6 330 aaPredicted RBP9.75□□□□□ -0.85
SSBP4-215ENST00000625926 NDRG3Q9UGV2 375 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 HAO1Q9UJM8 370 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 PCDHGB4Q9UN71 923 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 KCNE3Q9Y6H6 103 aa9.75□□□□□ -0.85
SSBP4-215ENST00000625926 MTORP42345 2549 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 GTPBP1O00178 669 aaKnown RBP9.74□□□□□ -0.85
SSBP4-215ENST00000625926 RNASET2O00584 256 aaKnown RBP9.74□□□□□ -0.85
SSBP4-215ENST00000625926 ADAMDEC1O15204 470 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 CD8BP10966 210 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 LBPP18428 481 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 MATN1P21941 496 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 ME2P23368 584 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 PSMA4P25789 261 aaKnown RBP9.74□□□□□ -0.85
SSBP4-215ENST00000625926 SOAT1P35610 550 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 EIF1P41567 113 aaKnown RBP9.74□□□□□ -0.85
SSBP4-215ENST00000625926 ATP12AP54707 1039 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 SIRPAP78324 504 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 ZNF117Q03924 483 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 FAM27E3Q08E93 113 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 BST1Q10588 318 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 PLPPR5Q32ZL2 321 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 PDSS1Q5T2R2 415 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 ANXA8L1Q5VT79 327 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 HHATQ5VTY9 493 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 OR4F3Q6IEY1 312 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 PPP4R4Q6NUP7 873 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 VWA1Q6PCB0 445 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 FAM214BQ7L5A3 538 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 CLECL1Q8IZS7 167 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 OR8J2Q8NGG1 315 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 OR10D3Q8NH80 312 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 RNF145Q96MT1 663 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 OR7D2Q96RA2 312 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 SLC39A3Q9BRY0 314 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 NUF2Q9BZD4 464 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 LIME1Q9H400 295 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 CCM2LQ9NUG4 571 aaPredicted RBP9.74□□□□□ -0.85
SSBP4-215ENST00000625926 ELOVL5Q9NYP7 299 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 ST6GALNAC2Q9UJ37 374 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 MCTS1Q9ULC4 181 aaKnown RBP9.74□□□□□ -0.85
SSBP4-215ENST00000625926 SPG11Q96JI7 2443 aa9.74□□□□□ -0.85
SSBP4-215ENST00000625926 ZNF407Q9C0G0 2248 aa9.73□□□□□ -0.85
SSBP4-215ENST00000625926 NPIPA5A0A0B4J1W7 369 aa9.73□□□□□ -0.85
SSBP4-215ENST00000625926 PRSS51A0A1B0GVH4 220 aa9.73□□□□□ -0.85
SSBP4-215ENST00000625926 SH3D21A4FU49 640 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms