RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 SOAT1P35610 550 aa22.71■■□□□ 1.23
VEGFA-229ENST00000621747 HBA1P69905 142 aa22.71■■□□□ 1.23
VEGFA-229ENST00000621747 MPP2Q14168 576 aa22.71■■□□□ 1.23
VEGFA-229ENST00000621747 GTPBP8Q8N3Z3 284 aaPredicted RBP22.71■■□□□ 1.23
VEGFA-229ENST00000621747 CNEP1R1Q8N9A8 125 aa22.71■■□□□ 1.23
VEGFA-229ENST00000621747 LINC01560Q8TB33 94 aa22.71■■□□□ 1.23
VEGFA-229ENST00000621747 FIG4Q92562 907 aa22.71■■□□□ 1.23
VEGFA-229ENST00000621747 SH3YL1Q96HL8 342 aaPredicted RBP22.71■■□□□ 1.23
VEGFA-229ENST00000621747 SORT1Q99523 831 aa22.71■■□□□ 1.23
VEGFA-229ENST00000621747 PAIP2Q9BPZ3 127 aaKnown RBP22.71■■□□□ 1.23
VEGFA-229ENST00000621747 HAO1Q9UJM8 370 aa22.71■■□□□ 1.23
VEGFA-229ENST00000621747 A8MXE2 369 aa22.7■■□□□ 1.22
VEGFA-229ENST00000621747 MSTNO14793 375 aa22.7■■□□□ 1.22
VEGFA-229ENST00000621747 DNAJA1P31689 397 aaKnown RBP22.7■■□□□ 1.22
VEGFA-229ENST00000621747 TESK1Q15569 626 aa22.7■■□□□ 1.22
VEGFA-229ENST00000621747 SGCBQ16585 318 aa22.7■■□□□ 1.22
VEGFA-229ENST00000621747 DCST2Q5T1A1 773 aa22.7■■□□□ 1.22
VEGFA-229ENST00000621747 HHATQ5VTY9 493 aa22.7■■□□□ 1.22
VEGFA-229ENST00000621747 FBXW10Q5XX13 1052 aa22.7■■□□□ 1.22
VEGFA-229ENST00000621747 MTERF4Q7Z6M4 381 aaKnown RBP22.7■■□□□ 1.22
VEGFA-229ENST00000621747 WDR75Q8IWA0 830 aaKnown RBP22.7■■□□□ 1.22
VEGFA-229ENST00000621747 LRRC34Q8IZ02 419 aa22.7■■□□□ 1.22
VEGFA-229ENST00000621747 OR5AK3PQ8NH89 298 aa22.7■■□□□ 1.22
VEGFA-229ENST00000621747 B4GALNT2Q8NHY0 566 aa22.7■■□□□ 1.22
VEGFA-229ENST00000621747 ZBTB9Q96C00 473 aa22.7■■□□□ 1.22
VEGFA-229ENST00000621747 DPY30Q9C005 99 aa22.7■■□□□ 1.22
VEGFA-229ENST00000621747 MED17Q9NVC6 651 aa22.7■■□□□ 1.22
VEGFA-229ENST00000621747 C7orf72A4D263 438 aa22.69■■□□□ 1.22
VEGFA-229ENST00000621747 H3BNH8 94 aa22.69■■□□□ 1.22
VEGFA-229ENST00000621747 SMNDC1O75940 238 aaKnown RBP eCLIP22.69■■□□□ 1.224e-7■■□□□ 12.8
VEGFA-229ENST00000621747 GOSR1O95249 250 aa22.69■■□□□ 1.22
VEGFA-229ENST00000621747 FCGR2AP12318 317 aa22.69■■□□□ 1.22
VEGFA-229ENST00000621747 FGFBP1Q14512 234 aa22.69■■□□□ 1.22
VEGFA-229ENST00000621747 PON3Q15166 354 aa22.69■■□□□ 1.22
VEGFA-229ENST00000621747 PLPPR5Q32ZL2 321 aa22.69■■□□□ 1.22
VEGFA-229ENST00000621747 OR4F3Q6IEY1 312 aa22.69■■□□□ 1.22
VEGFA-229ENST00000621747 FNDC9Q8TBE3 224 aa22.69■■□□□ 1.22
VEGFA-229ENST00000621747 PHOSPHO1Q8TCT1 267 aa22.69■■□□□ 1.22
VEGFA-229ENST00000621747 NRGNQ92686 78 aa22.69■■□□□ 1.22
VEGFA-229ENST00000621747 STARD4Q96DR4 205 aa22.69■■□□□ 1.22
VEGFA-229ENST00000621747 ZNF845Q96IR2 970 aaPredicted RBP22.69■■□□□ 1.22
VEGFA-229ENST00000621747 RNF122Q9H9V4 155 aa22.69■■□□□ 1.22
VEGFA-229ENST00000621747 PCDHGB4Q9UN71 923 aa22.69■■□□□ 1.22
VEGFA-229ENST00000621747 EDARQ9UNE0 448 aa22.69■■□□□ 1.22
VEGFA-229ENST00000621747 RNASET2O00584 256 aaKnown RBP22.68■■□□□ 1.22
VEGFA-229ENST00000621747 EIF1AYO14602 144 aaKnown RBP22.68■■□□□ 1.22
VEGFA-229ENST00000621747 CPOXP36551 454 aa22.68■■□□□ 1.22
VEGFA-229ENST00000621747 CD226Q15762 336 aa22.68■■□□□ 1.22
VEGFA-229ENST00000621747 VWA1Q6PCB0 445 aa22.68■■□□□ 1.22
VEGFA-229ENST00000621747 GGNQ86UU5 652 aa22.68■■□□□ 1.22
VEGFA-229ENST00000621747 ANKRD42Q8N9B4 389 aa22.68■■□□□ 1.22
VEGFA-229ENST00000621747 OR8J2Q8NGG1 315 aa22.68■■□□□ 1.22
VEGFA-229ENST00000621747 NINJ1Q92982 152 aa22.68■■□□□ 1.22
VEGFA-229ENST00000621747 DACH2Q96NX9 599 aa22.68■■□□□ 1.22
VEGFA-229ENST00000621747 OR7D2Q96RA2 312 aa22.68■■□□□ 1.22
VEGFA-229ENST00000621747 NUF2Q9BZD4 464 aa22.68■■□□□ 1.22
VEGFA-229ENST00000621747 PAQR5Q9NXK6 330 aaPredicted RBP22.68■■□□□ 1.22
VEGFA-229ENST00000621747 POLQO75417 2590 aa22.67■■□□□ 1.22
VEGFA-229ENST00000621747 DUXAA6NLW8 204 aa22.67■■□□□ 1.22
VEGFA-229ENST00000621747 LBPP18428 481 aa22.67■■□□□ 1.22
VEGFA-229ENST00000621747 ME2P23368 584 aa22.67■■□□□ 1.22
VEGFA-229ENST00000621747 EIF1AXP47813 144 aaKnown RBP22.67■■□□□ 1.22
VEGFA-229ENST00000621747 RAC1P63000 192 aa22.67■■□□□ 1.22
VEGFA-229ENST00000621747 BST1Q10588 318 aa22.67■■□□□ 1.22
VEGFA-229ENST00000621747 SPNS3Q6ZMD2 512 aa22.67■■□□□ 1.22
VEGFA-229ENST00000621747 CDC20BQ86Y33 519 aa22.67■■□□□ 1.22
VEGFA-229ENST00000621747 CLECL1Q8IZS7 167 aa22.67■■□□□ 1.22
VEGFA-229ENST00000621747 VPS37AQ8NEZ2 397 aa22.67■■□□□ 1.22
VEGFA-229ENST00000621747 RNF145Q96MT1 663 aa22.67■■□□□ 1.22
VEGFA-229ENST00000621747 PRRG4Q9BZD6 226 aa22.67■■□□□ 1.22
VEGFA-229ENST00000621747 MEAF6Q9HAF1 191 aa22.67■■□□□ 1.22
VEGFA-229ENST00000621747 KCNE3Q9Y6H6 103 aa22.67■■□□□ 1.22
VEGFA-229ENST00000621747 RNF103-CHMP3A0A140T963 221 aa22.66■■□□□ 1.22
VEGFA-229ENST00000621747 MATN1P21941 496 aa22.66■■□□□ 1.22
VEGFA-229ENST00000621747 EIF1P41567 113 aaKnown RBP22.66■■□□□ 1.22
VEGFA-229ENST00000621747 KIR2DL2P43627 348 aaPredicted RBP22.66■■□□□ 1.22
VEGFA-229ENST00000621747 ATP12AP54707 1039 aa22.66■■□□□ 1.22
VEGFA-229ENST00000621747 SIRPAP78324 504 aa22.66■■□□□ 1.22
VEGFA-229ENST00000621747 ZNF117Q03924 483 aa22.66■■□□□ 1.22
VEGFA-229ENST00000621747 KLHL26Q53HC5 615 aa22.66■■□□□ 1.22
VEGFA-229ENST00000621747 ANXA8L1Q5VT79 327 aa22.66■■□□□ 1.22
VEGFA-229ENST00000621747 PPP4R4Q6NUP7 873 aa22.66■■□□□ 1.22
VEGFA-229ENST00000621747 C6orf120Q7Z4R8 191 aa22.66■■□□□ 1.22
VEGFA-229ENST00000621747 OR5D16Q8NGK9 328 aa22.66■■□□□ 1.22
VEGFA-229ENST00000621747 OR4A15Q8NGL6 344 aa22.66■■□□□ 1.22
VEGFA-229ENST00000621747 TESCQ96BS2 214 aa22.66■■□□□ 1.22
VEGFA-229ENST00000621747 SLC35G5Q96KT7 338 aa22.66■■□□□ 1.22
VEGFA-229ENST00000621747 PNPOQ9NVS9 261 aa22.66■■□□□ 1.22
VEGFA-229ENST00000621747 NDRG3Q9UGV2 375 aa22.66■■□□□ 1.22
VEGFA-229ENST00000621747 NPIPA5A0A0B4J1W7 369 aa22.65■■□□□ 1.22
VEGFA-229ENST00000621747 SH3D21A4FU49 640 aa22.65■■□□□ 1.22
VEGFA-229ENST00000621747 NPIPA7E9PJI5 369 aa22.65■■□□□ 1.22
VEGFA-229ENST00000621747 ERLIN1O75477 346 aa22.65■■□□□ 1.22
VEGFA-229ENST00000621747 AK1P00568 194 aa22.65■■□□□ 1.22
VEGFA-229ENST00000621747 NPIPA8P0DM63 369 aa22.65■■□□□ 1.22
VEGFA-229ENST00000621747 CD1EP15812 388 aa22.65■■□□□ 1.22
VEGFA-229ENST00000621747 PCYT1AP49585 367 aa22.65■■□□□ 1.22
VEGFA-229ENST00000621747 ART1P52961 327 aa22.65■■□□□ 1.22
VEGFA-229ENST00000621747 CLNS1AP54105 237 aaKnown RBP22.65■■□□□ 1.22
VEGFA-229ENST00000621747 SUMO3P55854 103 aaPredicted RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms