RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 IFNA6P05013 189 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 S100A9P06702 114 aaKnown RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 SLC35G6P0C7Q6 338 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 MYOGP15173 224 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 CEBPBP17676 345 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 ARHGDIBP52566 201 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 SLC7A9P82251 487 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 OC90Q02509 493 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 PLEKHS1Q5SXH7 462 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 KHDRBS2Q5VWX1 349 aaKnown RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 C12orf73Q69YU5 71 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 CHRDL2Q6WN34 429 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 RNF165Q6ZSG1 346 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 PRICKLE2Q7Z3G6 844 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 FGF13Q92913 245 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 NUS1Q96E22 293 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 DNAJA3Q96EY1 480 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 C5orf34Q96MH7 638 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 RNF32Q9H0A6 362 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 DPEP2Q9H4A9 486 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 DMRT3Q9NQL9 472 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 B3GNT2Q9NY97 397 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 NLGN3Q9NZ94 848 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 GDE1Q9NZC3 331 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 BAIAP2Q9UQB8 552 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 KCNK6Q9Y257 313 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 SF3B6Q9Y3B4 125 aaKnown RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 VWA8A3KMH1 1905 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 ALPK3Q96L96 1907 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 A0A1W2PRG6 482 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 HMGN4O00479 90 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 LEFTY1O75610 366 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 CSNK2A2P19784 350 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 HLA-FP30511 346 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 GABRA5P31644 462 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 GALEQ14376 348 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 PRPF38BQ5VTL8 546 aaKnown RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 FAM71E1Q6IPT2 247 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 QSOX2Q6ZRP7 698 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 PEG10Q86TG7 708 aaKnown RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 CPOQ8IVL8 374 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 FTMTQ8N4E7 242 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 KLHL36Q8N4N3 616 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 FAM26EQ8N5C1 309 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 AMER3Q8N944 861 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ZBTB44Q8NCP5 570 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF248Q8NDW4 579 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 OR8D4Q8NGM9 314 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ORAI1Q96D31 301 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ECHDC3Q96DC8 303 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 PDXPQ96GD0 296 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF514Q96K75 400 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 FUZQ9BT04 418 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 OR51J1Q9H342 316 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 OR51I1Q9H343 314 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 FZD3Q9NPG1 666 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 P2RX2Q9UBL9 471 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 A4GNTQ9UNA3 340 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 TMEM5Q9Y2B1 443 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 LOC100509620A0A075B734 347 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF879B4DU55 563 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 PRODHO43272 600 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 C1GALT1C1LP0DN25 315 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ACP2P11117 423 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ANXA3P12429 323 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 HSD3B1P14060 373 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 UQCRC2P22695 453 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 PSMB5P28074 263 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ACSL1P33121 698 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 FAUP35544 74 aaKnown RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 OR12D2P58182 307 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ELAVL3Q14576 367 aaKnown RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 GRIN2CQ14957 1233 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 TIGD3Q6B0B8 471 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 HTR3DQ70Z44 454 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 RANBP3LQ86VV4 465 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 JAZF1Q86VZ6 243 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 CBARPQ8N350 705 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 TOMM5Q8N4H5 51 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 TSTD1Q8NFU3 115 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 OR13C5Q8NGS8 318 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 LRIG1Q96JA1 1093 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ORAI3Q9BRQ5 295 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 CRISPLD2Q9H0B8 497 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 XKR8Q9H6D3 395 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 METTL17Q9H7H0 456 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 BRF2Q9HAW0 419 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 GPN1Q9HCN4 374 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 TEX10Q9NXF1 929 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 MARK1Q9P0L2 795 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 TESQ9UGI8 421 aaKnown RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 MRPS33Q9Y291 106 aaKnown RBP6.51□□□□□ -1.37
NEDD9-216ENST00000620854 CHST2Q9Y4C5 530 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 DSPPQ9NZW4 1301 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 A0A087WUU8 490 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 PRAMEF27A3QJZ7 478 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF860A6NHJ4 632 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 ANXA2P2A6NMY6 339 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 XKRYO14609 159 aa6.51□□□□□ -1.37
NEDD9-216ENST00000620854 NDUFS4O43181 175 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms