RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ZNF775Q96BV0 537 aaPredicted RBP7.36□□□□□ -1.23
CPNE3-209ENST00000620393 SLC47A1Q96FL8 570 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 NODALQ96S42 347 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 SECISBP2Q96T21 854 aaKnown RBP7.36□□□□□ -1.23
CPNE3-209ENST00000620393 ARHGDIGQ99819 225 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 WFDC6Q9BQY6 131 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 SH2D2AQ9NP31 389 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 RLIMQ9NVW2 624 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 KLHL28Q9NXS3 571 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 ABCG2Q9UNQ0 655 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 SLC35A3Q9Y2D2 325 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 SLC9A8Q9Y2E8 581 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 KCNMB2Q9Y691 235 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 ENPP4Q9Y6X5 453 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 V9GYQ6 96 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 NUP210LQ5VU65 1888 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 A6NL46 340 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 GTPBP1O00178 669 aaKnown RBP7.35□□□□□ -1.23
CPNE3-209ENST00000620393 ADAM10O14672 748 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 NDUFB5O43674 189 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 BAG2O95816 211 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 CSTAP01040 98 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 IFNW1P05000 195 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 FCGR1AP12314 374 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 ITGA2P17301 1181 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 TNFRSF1BP20333 461 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 FASP25445 335 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 EVI2BP34910 448 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 CD96P40200 585 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 CASP3P42574 277 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 MAGEA2P43356 314 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 CYB561P49447 251 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 RPP38P78345 283 aaKnown RBP7.35□□□□□ -1.23
CPNE3-209ENST00000620393 SNTA1Q13424 505 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 NRF1Q16656 503 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 EIPR1Q53HC9 387 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 MRPL2Q5T653 305 aaKnown RBP7.35□□□□□ -1.23
CPNE3-209ENST00000620393 ZNF468Q5VIY5 522 aaPredicted RBP7.35□□□□□ -1.23
CPNE3-209ENST00000620393 FNDC7Q5VTL7 733 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 AGAP7PQ5VUJ5 663 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 BROXQ5VW32 411 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 SLC22A10Q63ZE4 541 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 TMEM81Q6P7N7 255 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 ISLR2Q6UXK2 745 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 LRRC69Q6ZNQ3 347 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 ZNF550Q7Z398 422 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 MARCH3Q86UD3 253 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 RBM45Q8IUH3 476 aaKnown RBP7.35□□□□□ -1.23
CPNE3-209ENST00000620393 LACC1Q8IV20 430 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 ZDHHC21Q8IVQ6 265 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 MISPQ8IVT2 679 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 BEST3Q8N1M1 668 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 ZNF614Q8N883 585 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 OR10G3Q8NGC4 313 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 OR4D11Q8NGI4 311 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 OR6T1Q8NGN1 323 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 OR5M3Q8NGP4 307 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 PRR7Q8TB68 274 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 PHOSPHO1Q8TCT1 267 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 GRHL3Q8TE85 626 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 PAQR8Q8TEZ7 354 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 DUSP19Q8WTR2 217 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 CNOT9Q92600 299 aaKnown RBP7.35□□□□□ -1.23
CPNE3-209ENST00000620393 NTNG2Q96CW9 530 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 AGAP4Q96P64 663 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 TBL1XR1Q9BZK7 514 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 RTN4RQ9BZR6 473 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 AMBRA1Q9C0C7 1298 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 LAT2Q9GZY6 243 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 ZNF552Q9H707 407 aaPredicted RBP7.35□□□□□ -1.23
CPNE3-209ENST00000620393 HHATLQ9HCP6 504 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 HPF1Q9NWY4 346 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 CNIH4Q9P003 139 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 NDUFAF4Q9P032 175 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 ABI3Q9P2A4 366 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 STX18Q9P2W9 335 aaKnown RBP7.35□□□□□ -1.23
CPNE3-209ENST00000620393 PRDM4Q9UKN5 801 aa7.35□□□□□ -1.23
CPNE3-209ENST00000620393 FAM32AQ9Y421 112 aaKnown RBP7.35□□□□□ -1.23
CPNE3-209ENST00000620393 CHCHD2Q9Y6H1 151 aaPredicted RBP7.35□□□□□ -1.23
CPNE3-209ENST00000620393 MED19A0JLT2 244 aaPredicted RBP7.34□□□□□ -1.23
CPNE3-209ENST00000620393 ANKRD33BA6NCL7 494 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 H0Y3Z8 333 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 hCG_2039718K7EN88 272 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 K7ENP7 123 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 M0R3H8 397 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 TAF4O00268 1085 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 CLOCKO15516 846 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 ZNF264O43296 627 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 FRS3O43559 492 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 EIF4E2O60573 245 aaKnown RBP7.34□□□□□ -1.23
CPNE3-209ENST00000620393 TPST2O60704 377 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 DPM1O60762 260 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 BCAS1O75363 584 aaPredicted RBP7.34□□□□□ -1.23
CPNE3-209ENST00000620393 TIPRLO75663 272 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 CEACAM4O75871 244 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 ATP6V1G2O95670 118 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 ANGPTL1O95841 491 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 WDPCPO95876 746 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 LDLRP01130 860 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 FABP3P05413 133 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms