RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	STAC	Q99469	402 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	TUBB1	Q9H4B7	451 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	NEK6	Q9HC98	313 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	FAM120C	Q9NX05	1096 aa	Known RBP	4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	MYOT	Q9UBF9	498 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	CYB5R1	Q9UHQ9	305 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	MGAT4B	Q9UQ53	548 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	SYCE1L	A8MT33	242 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	TEX46	H3BTG2	121 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	PDLIM1	O00151	329 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	TPST1	O60507	370 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	AK1	P00568	194 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	TUBG1	P23258	451 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	GIF	P27352	417 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	CYB561	P49447	251 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	PIGF	Q07326	219 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	SLC10A1	Q14973	349 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	PDCD4	Q53EL6	469 aa	Known RBP	4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF628	Q5EBL2	1059 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	FNDC7	Q5VTL7	733 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	TMEM198	Q66K66	360 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	CYB5R2	Q6BCY4	276 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	SIGIRR	Q6IA17	410 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	KDELC2	Q7Z4H8	507 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	DPPA2	Q7Z7J5	298 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	CMIP	Q8IY22	773 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	PAF1	Q8N7H5	531 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	RNF141	Q8WVD5	230 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	SGCD	Q92629	289 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	PIGT	Q969N2	578 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	TTYH2	Q9BSA4	534 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	BRINP2	Q9C0B6	783 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	TUBG2	Q9NRH3	451 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	DDX28	Q9NUL7	540 aa	Known RBP	4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	SLAMF8	Q9P0V8	285 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF225	Q9UK10	706 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	PSMD13	Q9UNM6	376 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	ASF1A	Q9Y294	204 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	VWA7	Q9Y334	891 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	MYO18B	Q8IUG5	2567 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	CFAP54	Q96N23	3096 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	FXYD1	O00168	92 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	EIF4EBP3	O60516	100 aa	Predicted RBP	4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	BMP7	P18075	431 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	CD53	P19397	219 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	AKT1	P31749	480 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	UQCRFS1	P47985	274 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	SLC37A1	P57057	533 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	PHC1	P78364	1004 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	EGR3	Q06889	387 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	TRIM25	Q14258	630 aa	Known RBP	4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	FAM83E	Q2M2I3	478 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZXDC	Q2QGD7	858 aa	Predicted RBP	4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	FRMPD2B	Q6IN97	320 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZFP1	Q6P2D0	407 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	VHLL	Q6RSH7	139 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	AGTRAP	Q6RW13	159 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	SPATA6L	Q8N4H0	392 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	CDC26	Q8NHZ8	85 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	DNAJB14	Q8TBM8	379 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	BRIX1	Q8TDN6	353 aa	Known RBP	4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	METTL21A	Q8WXB1	218 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	SPACA9	Q96E40	222 aa	Predicted RBP	4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	ELMO2	Q96JJ3	720 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	C3orf30	Q96M34	536 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	BDH2	Q9BUT1	245 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	TRIM54	Q9BYV2	358 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	NUF2	Q9BZD4	464 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	POLR2J2	Q9GZM3	115 aa	Known RBP	4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	POLR2J3	Q9H1A7	115 aa	Known RBP	4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	SYNPO2L	Q9H987	977 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	SLAMF7	Q9NQ25	335 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	DNAJC15	Q9Y5T4	150 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	CEPT1	Q9Y6K0	416 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	TENM4	Q6N022	2769 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322		A0A1B0GTL3	188 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	PRRG2	O14669	202 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	CD5L	O43866	347 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	GNAO1	P09471	354 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	UQCRB	P14927	111 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF26	P17031	533 aa	Predicted RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	PSMA4	P25789	261 aa	Known RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	RPL5	P46777	297 aa	Known RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	LIM2	P55344	173 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	RPL15	P61313	204 aa	Known RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	LOXL1	Q08397	574 aa	Predicted RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	SELENBP1	Q13228	472 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	APOF	Q13790	326 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	SNX32	Q86XE0	403 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	OFCC1	Q8IZS5	231 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	TSPEAR	Q8WU66	669 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	C12orf43	Q96C57	262 aa	Known RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	WDYHV1	Q96HA8	205 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF681	Q96N22	645 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	SLC29A1	Q99808	456 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	SORBS1	Q9BX66	1292 aa	Known RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	BCO1	Q9HAY6	547 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	SDR39U1	Q9NRG7	319 aa	Predicted RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	GID8	Q9NWU2	228 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	DUSP13	Q9UII6	198 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms