RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 CACNA1EQ15878 2313 aa17.61■□□□□ 0.41
PSPC1-206ENST00000619300 CPED1A4D0V7 1026 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 NPIPB9F8W1W9 429 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 GPR4P46093 362 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 AQP6Q13520 282 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 SNAPC1Q16533 368 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 ZSWIM7Q19AV6 140 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 MEDAGQ5VYS4 303 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 BCORP1Q8N888 145 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 POGLUT1Q8NBL1 392 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 OR8D4Q8NGM9 314 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 C9orf43Q8TAL5 461 aaPredicted RBP17.6■□□□□ 0.41
PSPC1-206ENST00000619300 TMEM27Q9HBJ8 222 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 IL20Q9NYY1 176 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 IGKV3D-11A0A0A0MRZ8 115 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 BCL10O95999 233 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 FBLP22087 321 aaKnown RBP17.6■□□□□ 0.41
PSPC1-206ENST00000619300 ATP12AP54707 1039 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 PSMD4P55036 377 aaKnown RBP17.6■□□□□ 0.41
PSPC1-206ENST00000619300 OCA2Q04671 838 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 SIGLEC14Q08ET2 396 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 SPCS2Q15005 226 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 NNATQ16517 81 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 MINDY4Q4G0A6 757 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 GUSBP11Q6P575 273 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 ZNF613Q6PF04 617 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 WDR88Q6ZMY6 472 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 ZNF574Q6ZN55 896 aaPredicted RBP17.6■□□□□ 0.41
PSPC1-206ENST00000619300 BCDIN3DQ7Z5W3 292 aaKnown RBP17.6■□□□□ 0.41
PSPC1-206ENST00000619300 TMEM151BQ8IW70 566 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 TMEM239Q8WW34 195 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 FGF11Q92914 225 aa17.6■□□□□ 0.41
PSPC1-206ENST00000619300 ATXN7L1Q9ULK2 861 aaPredicted RBP17.6■□□□□ 0.41
PSPC1-206ENST00000619300 UNC13CQ8NB66 2214 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 LY6G6EA0A0G2JKS1 128 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 A0A1B0GX78 115 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 M0R082 166 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 SIGLEC6O43699 453 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 CNOT3O75175 753 aaKnown RBP17.59■□□□□ 0.41
PSPC1-206ENST00000619300 ADORA3P0DMS8 318 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 CDK4P11802 303 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 CD36P16671 472 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 NCF4Q15080 339 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 TIGD6Q17RP2 521 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 TMPRSS9Q7Z410 1059 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 ARHGAP22Q7Z5H3 698 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 MAML2Q8IZL2 1156 aaPredicted RBP17.59■□□□□ 0.41
PSPC1-206ENST00000619300 C7orf57Q8NEG2 295 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 TSLPQ969D9 159 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 TSSK6Q9BXA6 273 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 DNAJB12Q9NXW2 375 aaKnown RBP17.59■□□□□ 0.41
PSPC1-206ENST00000619300 ZNF223Q9UK11 482 aaPredicted RBP17.59■□□□□ 0.41
PSPC1-206ENST00000619300 U3KQA8 63 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 COL6A3P12111 3177 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 ANKRD33BA6NCL7 494 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 A8MUA0 341 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 DYRK3O43781 588 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 PTHP01270 115 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 ADRA2AP08913 450 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 TGFBR2P37173 567 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 ACAA2P42765 397 aaKnown RBP17.59■□□□□ 0.41
PSPC1-206ENST00000619300 SLC37A1P57057 533 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 FGFBP1Q14512 234 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 SYT14P1Q58G82 188 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 PERM1Q5SV97 790 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 PRPF38BQ5VTL8 546 aaKnown RBP17.59■□□□□ 0.41
PSPC1-206ENST00000619300 ZSCAN1Q8NBB4 408 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 RNF217Q8TC41 542 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 SLC35B4Q969S0 331 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 CLIP3Q96DZ5 547 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 LRR1Q96L50 414 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 SLC38A2Q96QD8 506 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 CLCA3PQ9Y6N3 262 aa17.59■□□□□ 0.41
PSPC1-206ENST00000619300 CDC42EP2O14613 210 aa17.58■□□□□ 0.4
PSPC1-206ENST00000619300 SLC22A1O15245 554 aa17.58■□□□□ 0.4
PSPC1-206ENST00000619300 DBTP11182 482 aaKnown RBP17.58■□□□□ 0.4
PSPC1-206ENST00000619300 LIPAP38571 399 aa17.58■□□□□ 0.4
PSPC1-206ENST00000619300 RHAGQ02094 409 aa17.58■□□□□ 0.4
PSPC1-206ENST00000619300 ZNF91Q05481 1191 aa17.58■□□□□ 0.4
PSPC1-206ENST00000619300 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.58■□□□□ 0.42e-7■■■■■ 45
PSPC1-206ENST00000619300 VWA2Q5GFL6 755 aa17.58■□□□□ 0.4
PSPC1-206ENST00000619300 CLEC12AQ5QGZ9 265 aa17.58■□□□□ 0.4
PSPC1-206ENST00000619300 C1orf189Q5VU69 101 aa17.58■□□□□ 0.4
PSPC1-206ENST00000619300 ZNF620Q6ZNG0 422 aa17.58■□□□□ 0.4
PSPC1-206ENST00000619300 C1orf210Q8IVY1 113 aa17.58■□□□□ 0.4
PSPC1-206ENST00000619300 FAM181AQ8N9Y4 354 aa17.58■□□□□ 0.4
PSPC1-206ENST00000619300 TMEM163Q8TC26 289 aa17.58■□□□□ 0.4
PSPC1-206ENST00000619300 TMEM80Q96HE8 168 aa17.58■□□□□ 0.4
PSPC1-206ENST00000619300 ZNF582Q96NG8 517 aaPredicted RBP17.58■□□□□ 0.4
PSPC1-206ENST00000619300 SLC46A1Q96NT5 459 aa17.58■□□□□ 0.4
PSPC1-206ENST00000619300 TBC1D23Q9NUY8 699 aa17.58■□□□□ 0.4
PSPC1-206ENST00000619300 PTNP21246 168 aa17.57■□□□□ 0.4
PSPC1-206ENST00000619300 PRKCDQ05655 676 aa17.57■□□□□ 0.4
PSPC1-206ENST00000619300 ARHGAP40Q5TG30 622 aa17.57■□□□□ 0.4
PSPC1-206ENST00000619300 ZNF550Q7Z398 422 aa17.57■□□□□ 0.4
PSPC1-206ENST00000619300 CMIPQ8IY22 773 aa17.57■□□□□ 0.4
PSPC1-206ENST00000619300 CLDN22Q8N7P3 220 aa17.57■□□□□ 0.4
PSPC1-206ENST00000619300 ZNF321PQ8N8H1 164 aa17.57■□□□□ 0.4
PSPC1-206ENST00000619300 OR4C3Q8NH37 302 aa17.57■□□□□ 0.4
PSPC1-206ENST00000619300 TEX12Q9BXU0 123 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms