RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 RETREG3Q86VR2 466 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 CLECL1Q8IZS7 167 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 C8orf59Q8N0T1 100 aaPredicted RBP4.83□□□□□ -1.64
SHMT1-211ENST00000618902 TAGAPQ8N103 731 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 BEST3Q8N1M1 668 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 CLEC4FQ8N1N0 589 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF786Q8N393 782 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 VWA5B2Q8N398 1253 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 METTL25Q8N6Q8 603 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 RNF148Q8N7C7 305 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 MDS2Q8NDY4 140 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 OR52R1Q8NGF1 315 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 OR5K1Q8NHB7 308 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 C16orf52Q8NHV5 167 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 FNDC8Q8TC99 324 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF675Q8TD23 568 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF566Q969W8 418 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 RELTQ969Z4 430 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 ADIPOR1Q96A54 375 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 PPCDCQ96CD2 204 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 GIMAP5Q96F15 307 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 C16orf58Q96GQ5 468 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 VSTM2LQ96N03 204 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 SIGLEC12Q96PQ1 595 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 BBS4Q96RK4 519 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 CGREF1Q99674 301 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 WWTR1Q9GZV5 400 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 OR10A5Q9H207 317 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 SEMA6AQ9H2E6 1030 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 SERHL2Q9H4I8 314 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 CXorf36Q9H7Y0 433 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 SERHLQ9NQF3 203 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 SLC6A13Q9NSD5 602 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 CHCHD3Q9NX63 227 aaKnown RBP4.83□□□□□ -1.64
SHMT1-211ENST00000618902 ANKRD10Q9NXR5 420 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 QPCTLQ9NXS2 382 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 GALNT8Q9NY28 637 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 CNIH4Q9P003 139 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 SH3BP4Q9P0V3 963 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 NTMQ9P121 344 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 LUZP4Q9P127 313 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 LRFN1Q9P244 771 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 MYOTQ9UBF9 498 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 ENOPH1Q9UHY7 261 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 RPS6KA6Q9UK32 745 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 TPRKBQ9Y3C4 175 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 HRH3Q9Y5N1 445 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 SNX5Q9Y5X3 404 aa4.83□□□□□ -1.64
SHMT1-211ENST00000618902 FREM3P0C091 2139 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 MYO7BQ6PIF6 2116 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 PCNX3Q9H6A9 2034 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 A0A087WV62 115 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 GXYLT2A0PJZ3 443 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 ELOVL7A1L3X0 281 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 OR14I1A6ND48 311 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 A8MVJ9 347 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 EVPLLA8MZ36 301 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 ACOT7O00154 380 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 UPK1AO00322 258 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 PLOD2O00469 737 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 SOCS2O14508 198 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 GNGT2O14610 69 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 ADAM10O14672 748 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 PDPK1O15530 556 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 NME2P1O60361 137 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 ITGA10O75578 1167 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 SLC25A12O75746 678 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 OR2J2O76002 312 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 NEURL1O76050 574 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 SEC14L2O76054 403 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 OR6B1O95007 311 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 CT45A8P0DMV1 189 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 CT45A9P0DMV2 189 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 THRBP10828 461 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 ACP2P11117 423 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 GP1BBP13224 206 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 HOXB9P17482 250 aaPredicted RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 CCNA2P20248 432 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 CAPN3P20807 821 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 PRPS1L1P21108 318 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 NME2P22392 152 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 MPIP34949 423 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 MSX2P35548 267 aaPredicted RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 HPCAL1P37235 193 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 RPL3P39023 403 aaKnown RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 SOX3P41225 446 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 MAP3K8P41279 467 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 CDKN2CP42773 168 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 SERPINB10P48595 397 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 SSR4P51571 173 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 NR0B1P51843 470 aaKnown RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 MLLT10P55197 1068 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 TUBA1BP68363 451 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 HBA1P69905 142 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 TEKQ02763 1124 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 HSPB3Q12988 150 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 SNTA1Q13424 505 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 GAB1Q13480 694 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 DAG1Q14118 895 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 KEAP1Q14145 624 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms