RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ATOH8Q96SQ7 321 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 GPR22Q99680 433 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 PRRG4Q9BZD6 226 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 MYNNQ9NPC7 610 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 SLC17A5Q9NRA2 495 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 MOCS1Q9NZB8 636 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 EMC3Q9P0I2 261 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 MYOCOSA0A1B0GUC4 107 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 SYCE1LA8MT33 242 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 MYO1GB0I1T2 1018 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 SHOX2O60902 331 aaPredicted RBP4.01□□□□□ -1.77
SNCA-213ENST00000618500 TGFAP01135 160 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 TGFB1P01137 390 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 ERCC1P07992 297 aaPredicted RBP4.01□□□□□ -1.77
SNCA-213ENST00000618500 PCNAP12004 261 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 PCSK2P16519 638 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 HSPA7P48741 367 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 RPL15P61313 204 aaKnown RBP4.01□□□□□ -1.77
SNCA-213ENST00000618500 SGCBQ16585 318 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 FAM209AQ5JX71 171 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 SAXO2Q658L1 398 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 C9orf139Q6ZV77 190 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 IL17RELQ6ZVW7 336 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 GSTA5Q7RTV2 222 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 REC114Q7Z4M0 266 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 ZDHHC22Q8N966 263 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 KCTD4Q8WVF5 259 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 ANKRD49Q8WVL7 239 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 TMEM45BQ96B21 275 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 RBBP8Q99708 897 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 RAB1BQ9H0U4 201 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 MMP27Q9H306 513 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 OR51B5Q9H339 312 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 TSPY26PQ9H489 355 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 TAS2R7Q9NYW3 318 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 OPTCQ9UBM4 332 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 MCM8Q9UJA3 840 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 TNPO3Q9Y5L0 923 aaKnown RBP4.01□□□□□ -1.77
SNCA-213ENST00000618500 TEX264Q9Y6I9 313 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 ATRQ13535 2644 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 A0A0J9YW62 118 aa4□□□□□ -1.77
SNCA-213ENST00000618500 A0A1W2PRB8 838 aa4□□□□□ -1.77
SNCA-213ENST00000618500 E7ESA3 106 aa4□□□□□ -1.77
SNCA-213ENST00000618500 EIF1AYO14602 144 aaKnown RBP4□□□□□ -1.77
SNCA-213ENST00000618500 DNALI1O14645 258 aaPredicted RBP4□□□□□ -1.77
SNCA-213ENST00000618500 TBX19O60806 448 aa4□□□□□ -1.77
SNCA-213ENST00000618500 RAMP1O60894 148 aa4□□□□□ -1.77
SNCA-213ENST00000618500 REM1O75628 298 aa4□□□□□ -1.77
SNCA-213ENST00000618500 PNPP00491 289 aa4□□□□□ -1.77
SNCA-213ENST00000618500 RNASE1P07998 156 aaKnown RBP4□□□□□ -1.77
SNCA-213ENST00000618500 LINGO3P0C6S8 592 aa4□□□□□ -1.77
SNCA-213ENST00000618500 EPB42P16452 691 aa4□□□□□ -1.77
SNCA-213ENST00000618500 PGCP20142 388 aa4□□□□□ -1.77
SNCA-213ENST00000618500 GDF5P43026 501 aa4□□□□□ -1.77
SNCA-213ENST00000618500 ALDH18A1P54886 795 aaKnown RBP4□□□□□ -1.77
SNCA-213ENST00000618500 RAC3P60763 192 aa4□□□□□ -1.77
SNCA-213ENST00000618500 SELENBP1Q13228 472 aa4□□□□□ -1.77
SNCA-213ENST00000618500 OR4D1Q15615 310 aa4□□□□□ -1.77
SNCA-213ENST00000618500 GABRA6Q16445 453 aa4□□□□□ -1.77
SNCA-213ENST00000618500 DECR1Q16698 335 aa4□□□□□ -1.77
SNCA-213ENST00000618500 C18orf21Q32NC0 220 aaPredicted RBP4□□□□□ -1.77
SNCA-213ENST00000618500 XP32Q5T750 250 aa4□□□□□ -1.77
SNCA-213ENST00000618500 FAM205BPQ63HN1 556 aa4□□□□□ -1.77
SNCA-213ENST00000618500 AP1ARQ63HQ0 302 aa4□□□□□ -1.77
SNCA-213ENST00000618500 ZCCHC12Q6PEW1 402 aa4□□□□□ -1.77
SNCA-213ENST00000618500 FCRLAQ7L513 359 aa4□□□□□ -1.77
SNCA-213ENST00000618500 OR2L13Q8N349 312 aa4□□□□□ -1.77
SNCA-213ENST00000618500 CDYL2Q8N8U2 506 aa4□□□□□ -1.77
SNCA-213ENST00000618500 FAM76AQ8TAV0 307 aa4□□□□□ -1.77
SNCA-213ENST00000618500 STAG3L4Q8TBR4 150 aa4□□□□□ -1.77
SNCA-213ENST00000618500 ZNF75CPQ92670 426 aaPredicted RBP4□□□□□ -1.77
SNCA-213ENST00000618500 ARL8AQ96BM9 186 aa4□□□□□ -1.77
SNCA-213ENST00000618500 C1QTNF3Q9BXJ4 246 aa4□□□□□ -1.77
SNCA-213ENST00000618500 COQ10BQ9H8M1 238 aa4□□□□□ -1.77
SNCA-213ENST00000618500 NMRAL1Q9HBL8 299 aa4□□□□□ -1.77
SNCA-213ENST00000618500 ACSS1Q9NUB1 689 aaPredicted RBP4□□□□□ -1.77
SNCA-213ENST00000618500 MED17Q9NVC6 651 aa4□□□□□ -1.77
SNCA-213ENST00000618500 NMRK1Q9NWW6 199 aa4□□□□□ -1.77
SNCA-213ENST00000618500 TAS2R9Q9NYW1 312 aa4□□□□□ -1.77
SNCA-213ENST00000618500 EGFL7Q9UHF1 273 aa4□□□□□ -1.77
SNCA-213ENST00000618500 BCAP29Q9UHQ4 241 aa4□□□□□ -1.77
SNCA-213ENST00000618500 C19orf53Q9UNZ5 99 aaPredicted RBP4□□□□□ -1.77
SNCA-213ENST00000618500 POLR3KQ9Y2Y1 108 aaPredicted RBP4□□□□□ -1.77
SNCA-213ENST00000618500 ZNF780BQ9Y6R6 833 aa4□□□□□ -1.77
SNCA-213ENST00000618500 NINQ8N4C6 2090 aa4□□□□□ -1.77
SNCA-213ENST00000618500 DSPPQ9NZW4 1301 aa4□□□□□ -1.77
SNCA-213ENST00000618500 CNTRLQ7Z7A1 2325 aa4□□□□□ -1.77
SNCA-213ENST00000618500 H3BML4 177 aa4□□□□□ -1.77
SNCA-213ENST00000618500 LILRA1O75019 489 aa4□□□□□ -1.77
SNCA-213ENST00000618500 FZD7O75084 574 aa4□□□□□ -1.77
SNCA-213ENST00000618500 ALX3O95076 343 aa4□□□□□ -1.77
SNCA-213ENST00000618500 WNT11O96014 354 aa4□□□□□ -1.77
SNCA-213ENST00000618500 APEX1P27695 318 aaKnown RBP4□□□□□ -1.77
SNCA-213ENST00000618500 EIF1AXP47813 144 aaKnown RBP4□□□□□ -1.77
SNCA-213ENST00000618500 CLK1P49759 484 aaKnown RBP4□□□□□ -1.77
SNCA-213ENST00000618500 NAP1L1P55209 391 aaKnown RBP4□□□□□ -1.77
SNCA-213ENST00000618500 CARD18P57730 90 aa4□□□□□ -1.77
SNCA-213ENST00000618500 TAS2R39P59534 338 aa4□□□□□ -1.77
SNCA-213ENST00000618500 PSG6Q00889 435 aa4□□□□□ -1.77
SNCA-213ENST00000618500 CSTF3Q12996 717 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms