RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 HLA-BQ31612 363 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 PLK5Q496M5 336 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 PERM1Q5SV97 790 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 PLAG1Q6DJT9 500 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 SLC27A4Q6P1M0 643 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 ZBTB46Q86UZ6 589 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 BCORP1Q8N888 145 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 SAP25Q8TEE9 199 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 ZNF501Q96CX3 271 aaPredicted RBP16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 SENP5Q96HI0 755 aaPredicted RBP16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 OR1F2PQ96R84 312 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 SH3GL3Q99963 347 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 POLR2J2Q9GZM3 115 aaKnown RBP16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 ZNF768Q9H5H4 540 aaKnown RBP16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 SERTAD3Q9UJW9 196 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 MMACHCQ9Y4U1 282 aa16.03■□□□□ 0.16
PCDHGC3-205ENST00000617641 LY6G6EA0A0G2JKS1 128 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 LAMTOR5O43504 91 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 FMO6PO60774 539 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 ADAM11O75078 769 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 CD36P16671 472 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 FBLP22087 321 aaKnown RBP16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 GALNSP34059 522 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 STAT5AP42229 794 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 ZNF91Q05481 1191 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 DSG2Q14126 1118 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 OCLNQ16625 522 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 TIGD6Q17RP2 521 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 KMT5CQ86Y97 462 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 FAM26EQ8N5C1 309 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 PFN4Q8NHR9 129 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 GRHL3Q8TE85 626 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 DUSP23Q9BVJ7 150 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 TSSK6Q9BXA6 273 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 ZNF304Q9HCX3 659 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 DNAJB12Q9NXW2 375 aaKnown RBP16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 SUSD2Q9UGT4 822 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 U3KQA8 63 aa16.02■□□□□ 0.16
PCDHGC3-205ENST00000617641 DSCR3O14972 297 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 SIGLEC6O43699 453 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 GUSBP08236 651 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 PIPP12273 146 aaPredicted RBP16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 MLLT10P55197 1068 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 EFNB1P98172 346 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 NR0B2Q15466 257 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 SYT14P1Q58G82 188 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 VWA2Q5GFL6 755 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 ZNF574Q6ZN55 896 aaPredicted RBP16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 PRSS58Q8IYP2 241 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 MAML2Q8IZL2 1156 aaPredicted RBP16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 OR4C6Q8NH72 309 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 TMEM239Q8WW34 195 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 LRR1Q96L50 414 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 LMF1Q96S06 567 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 DPYSL5Q9BPU6 564 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 ZNF559Q9BR84 538 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 CDCA4Q9BXL8 241 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 TBC1D23Q9NUY8 699 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 IL20RAQ9UHF4 553 aa16.02■□□□□ 0.15
PCDHGC3-205ENST00000617641 VPS13AQ96RL7 3174 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 MUC3AQ02505 3323 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 IGKV3D-11A0A0A0MRZ8 115 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 NPIPB9F8W1W9 429 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 KPNA4O00629 521 aaPredicted RBP16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 CFIP05156 583 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 DBTP11182 482 aaKnown RBP16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 ZNF141Q15928 474 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 ARHGAP40Q5TG30 622 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 ZNF620Q6ZNG0 422 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 QSOX2Q6ZRP7 698 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 TMEM151BQ8IW70 566 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 ZSCAN1Q8NBB4 408 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 RPL3LQ92901 407 aaKnown RBP16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 FGF11Q92914 225 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 G6PC3Q9BUM1 346 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 OR8D2Q9GZM6 311 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 C20orf141Q9NUB4 165 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 FLRT3Q9NZU0 649 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 PRODH2Q9UF12 536 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 ZNF223Q9UK11 482 aaPredicted RBP16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 GPR52Q9Y2T5 361 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 RPL36Q9Y3U8 105 aaKnown RBP16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 SEC16AO15027 2179 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 MSL3P1P0C860 447 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 FUT1P19526 365 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 VBP1P61758 197 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 BIKQ13323 160 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 SLC30A6Q6NXT4 461 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 TMEM71Q6P5X7 295 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 MRGPREQ86SM8 312 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 GRAMD2AQ8IUY3 354 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 OR4Q3Q8NH05 313 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 OR4C3Q8NH37 302 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 WDR36Q8NI36 951 aaKnown RBP16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 NDNFQ8TB73 568 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 ZNF582Q96NG8 517 aaPredicted RBP16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 OR5M11Q96RB7 305 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 DPH1Q9BZG8 443 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 TMEM27Q9HBJ8 222 aa16.01■□□□□ 0.15
PCDHGC3-205ENST00000617641 ATP13A2Q9NQ11 1180 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms