RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 TUBA4AP68366 448 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 SQSTM1Q13501 440 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 OR1Q1Q15612 314 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 MED25Q71SY5 747 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 SPATC1Q76KD6 591 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 CADM2Q8N3J6 435 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 ZSCAN1Q8NBB4 408 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 SETD9Q8NE22 299 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 OR5M3Q8NGP4 307 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 RHOXF1Q8NHV9 184 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 SLC2A12Q8TD20 617 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 C8orf44Q96CB5 159 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 CRELD1Q96HD1 420 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 DHRS1Q96LJ7 313 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 STACQ99469 402 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 ENKD1Q9H0I2 346 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 WARS2Q9UGM6 360 aaKnown RBP7.2□□□□□ -1.26
NEK3-207ENST00000617054 CBLCQ9ULV8 474 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 IFT52Q9Y366 437 aa7.2□□□□□ -1.26
NEK3-207ENST00000617054 DCHS1Q96JQ0 3298 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 EIF1AYO14602 144 aaKnown RBP7.19□□□□□ -1.26
NEK3-207ENST00000617054 AGR2O95994 175 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 LCKP06239 509 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 SP9P0CG40 484 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 OSMP13725 252 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 ZNF28P17035 718 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 SLC37A1P57057 533 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 SLC35A2P78381 396 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 IGLV3-21P80748 117 aaPredicted RBP7.19□□□□□ -1.26
NEK3-207ENST00000617054 NR1D2Q14995 579 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 ANGPT1Q15389 498 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 EXOSC6Q5RKV6 272 aaKnown RBP7.19□□□□□ -1.26
NEK3-207ENST00000617054 TCEANCQ8N8B7 351 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 STT3BQ8TCJ2 826 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 FBLIM1Q8WUP2 373 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 SLC38A4Q969I6 547 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 ZNF524Q96C55 264 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 ADOQ96SZ5 270 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 PITX2Q99697 317 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 NUDT9Q9BW91 350 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 RTN4RQ9BZR6 473 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 C12orf49Q9H741 205 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 CACYBPQ9HB71 228 aaKnown RBP7.19□□□□□ -1.26
NEK3-207ENST00000617054 SPENQ96T58 3664 aaKnown RBP7.19□□□□□ -1.26
NEK3-207ENST00000617054 SMIM31A0A1B0GVY4 71 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 ZAR1LA6NP61 321 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 LRRN3E7EW58 273 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 TLX2O43763 284 aaPredicted RBP7.19□□□□□ -1.26
NEK3-207ENST00000617054 PRAMEF2O60811 474 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 COQ9O75208 318 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 RFPL3O75679 317 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 STSP08842 583 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 PCMT1P22061 227 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 MASP1P48740 699 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 ESRRGP62508 458 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 RHAGQ02094 409 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 FUT7Q11130 342 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 ST3GAL3Q11203 375 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 SLC30A6Q6NXT4 461 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 APOOLQ6UXV4 268 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 B3GLCTQ6Y288 498 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 COX15Q7KZN9 410 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 PRSS42Q7Z5A4 293 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 OR8D4Q8NGM9 314 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 GGHQ92820 318 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 MPP4Q96JB8 637 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 ZC3H10Q96K80 434 aaKnown RBP7.19□□□□□ -1.26
NEK3-207ENST00000617054 DPH1Q9BZG8 443 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 Q9N2J8 555 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 BOD1L1Q8NFC6 3051 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 SDK2Q58EX2 2172 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 MED12Q93074 2177 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 ZFHX2Q9C0A1 2572 aaPredicted RBP7.19□□□□□ -1.26
NEK3-207ENST00000617054 PMS2P1A4D2B8 440 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 TRIM64CA6NLI5 447 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 E9PQ18 207 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 MASP2O00187 686 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 SYT5O00445 386 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 DSCR3O14972 297 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 PRKYO43930 277 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 ENTPD6O75354 484 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 ATE1O95260 518 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 SLC2A10O95528 541 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 ADAP00813 363 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 DBIP07108 87 aaKnown RBP7.19□□□□□ -1.26
NEK3-207ENST00000617054 NR0B1P51843 470 aaKnown RBP7.19□□□□□ -1.26
NEK3-207ENST00000617054 IL18R1Q13478 541 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 GINS1Q14691 196 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 PRAMEF8Q5VWM4 474 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 PRAMEF7Q5VXH5 474 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 FCRLBQ6BAA4 426 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 DHRS4L2Q6PKH6 230 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 CBLN3Q6UW01 205 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 APLFQ8IW19 511 aaPredicted RBP7.19□□□□□ -1.26
NEK3-207ENST00000617054 ZNF721Q8TF20 911 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 OTULINQ96BN8 352 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 ISOC1Q96CN7 298 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 SH3YL1Q96HL8 342 aaPredicted RBP7.19□□□□□ -1.26
NEK3-207ENST00000617054 GFM1Q96RP9 751 aaKnown RBP7.19□□□□□ -1.26
NEK3-207ENST00000617054 PRSS27Q9BQR3 290 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms