RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 SLC25A52Q3SY17 297 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 HIKESHIQ53FT3 197 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 OTUD3Q5T2D3 398 aaPredicted RBP4.26□□□□□ -1.73
RFC3-203ENST00000616236 BEND3Q5T5X7 828 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 AGBL2Q5U5Z8 902 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 WSCD1Q658N2 575 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 TMEM220Q6QAJ8 160 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 C9orf47Q6ZRZ4 202 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 APTXQ7Z2E3 356 aaKnown RBP4.26□□□□□ -1.73
RFC3-203ENST00000616236 RAB42Q8N4Z0 105 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 ZNRF1Q8ND25 227 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 TRPV1Q8NER1 839 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 FAM110BQ8TC76 370 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 TBCKQ8TEA7 893 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 IFT74Q96LB3 600 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 RCHY1Q96PM5 261 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 FMO2Q99518 471 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 RHOXF2Q9BQY4 288 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 ST6GALNAC5Q9BVH7 336 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 VCPKMTQ9H867 229 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 VANGL2Q9ULK5 521 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 PPP1R3CQ9UQK1 317 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 TRAF3IP3Q9Y228 551 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 RASD1Q9Y272 281 aa4.26□□□□□ -1.73
RFC3-203ENST00000616236 TRBV5-4A0A0C4DH59 114 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 A0A1W2PPE3 182 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 OR6C65A6NJZ3 312 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 PRKAB2O43741 272 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 LGI1O95970 557 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 GAPDHP04406 335 aaKnown RBP4.25□□□□□ -1.73
RFC3-203ENST00000616236 OR9G9P0C7N8 305 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 MCF2P10911 925 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 TUBG1P23258 451 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 BMI1P35226 326 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 MAP2K2P36507 400 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 GYG1P46976 350 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 CD151P48509 253 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 CSNK1EP49674 416 aaKnown RBP4.25□□□□□ -1.73
RFC3-203ENST00000616236 HLCSP50747 726 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 PLP1P60201 277 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 ACY1Q03154 408 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 LIPEQ05469 1076 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 ILF3Q12906 894 aaKnown RBP eCLIP4.25□□□□□ -1.73
RFC3-203ENST00000616236 TGFBIQ15582 683 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 CHRNA6Q15825 494 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 STK11Q15831 433 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 FFAR4Q5NUL3 377 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 TMEM53Q6P2H8 277 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 PAQR6Q6TCH4 344 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 APOOLQ6UXV4 268 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 PRSS48Q7RTY5 328 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 CCDC71Q8IV32 467 aaPredicted RBP4.25□□□□□ -1.73
RFC3-203ENST00000616236 LSMEM2Q8N112 164 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 DHRSXQ8N5I4 330 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 DRAXINQ8NBI3 349 aaPredicted RBP4.25□□□□□ -1.73
RFC3-203ENST00000616236 OR4C5Q8NGB2 326 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 HCAR2Q8TDS4 363 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 AENQ8WTP8 325 aaKnown RBP4.25□□□□□ -1.73
RFC3-203ENST00000616236 ZNF707Q96C28 371 aaPredicted RBP4.25□□□□□ -1.73
RFC3-203ENST00000616236 CNRIP1Q96F85 164 aaPredicted RBP4.25□□□□□ -1.73
RFC3-203ENST00000616236 FAM173AQ9BQD7 235 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 DPH7Q9BTV6 452 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 CABLES2Q9BTV7 478 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 DNTTIP1Q9H147 329 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 RNF41Q9H4P4 317 aaPredicted RBP4.25□□□□□ -1.73
RFC3-203ENST00000616236 C6orf106Q9H6K1 298 aaPredicted RBP4.25□□□□□ -1.73
RFC3-203ENST00000616236 CYP3A43Q9HB55 503 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 TUBG2Q9NRH3 451 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 FAM120CQ9NX05 1096 aaKnown RBP4.25□□□□□ -1.73
RFC3-203ENST00000616236 RCOR3Q9P2K3 495 aaPredicted RBP4.25□□□□□ -1.73
RFC3-203ENST00000616236 PSMC3IPQ9P2W1 217 aaPredicted RBP4.25□□□□□ -1.73
RFC3-203ENST00000616236 PEF1Q9UBV8 284 aaKnown RBP4.25□□□□□ -1.73
RFC3-203ENST00000616236 PITPNC1Q9UKF7 332 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 IKZF2Q9UKS7 526 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 EXOGQ9Y2C4 368 aaKnown RBP4.25□□□□□ -1.73
RFC3-203ENST00000616236 OARD1Q9Y530 152 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 CSNK1G3Q9Y6M4 447 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 COMMD3-BMI1R4GMX3 469 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 INSRP06213 1382 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 TMEM94Q12767 1356 aa4.25□□□□□ -1.73
RFC3-203ENST00000616236 KIF27Q86VH2 1401 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 TRAV25A0A0B4J276 109 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 IGHV3-20A0A0C4DH32 117 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 SMCO3A2RU48 225 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 IGLON5A6NGN9 336 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 RNF212BA8MTL3 300 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 C11orf98E9PRG8 122 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 G3V2L1 256 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 KIF2AO00139 706 aaPredicted RBP4.24□□□□□ -1.73
RFC3-203ENST00000616236 RAMP3O60896 148 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 OAZ2O95190 189 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 H6PDO95479 791 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 IGHG3P01860 377 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 CPN2P22792 545 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 CD1BP29016 333 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 CD1CP29017 333 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 CRYBB2P43320 205 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 RAB9AP51151 201 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 NDST2P52849 883 aa4.24□□□□□ -1.73
RFC3-203ENST00000616236 HADHBP55084 474 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms