RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 ABCB10Q9NRK6 738 aa17.74■□□□□ 0.43
MMP28-204ENST00000615136 SEC14L4Q9UDX3 406 aa17.74■□□□□ 0.43
MMP28-204ENST00000615136 A0A075B6Q4 140 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 CCNYL3P0C7X3 344 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 RPS4Y1P22090 263 aaKnown RBP17.73■□□□□ 0.43
MMP28-204ENST00000615136 CSF2RBP32927 897 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 PSG6Q00889 435 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 ZNF155Q12901 538 aaPredicted RBP17.73■□□□□ 0.43
MMP28-204ENST00000615136 TRAM2Q15035 370 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 SNAP47Q5SQN1 464 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 STEAP3Q658P3 488 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 CADM3Q8N126 398 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 ZNF619Q8N2I2 560 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 OR52I1Q8NGK6 324 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 GNPDA2Q8TDQ7 276 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 LRR1Q96L50 414 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 STACQ99469 402 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 MCHR1Q99705 422 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 CPNE5Q9HCH3 593 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 POLE4Q9NR33 117 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 MRPS18AQ9NVS2 196 aaKnown RBP17.73■□□□□ 0.43
MMP28-204ENST00000615136 QPCTLQ9NXS2 382 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 EPHA6Q9UF33 1036 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 UNC13CQ8NB66 2214 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 RP1P56715 2156 aa17.73■□□□□ 0.43
MMP28-204ENST00000615136 FRYLO94915 3013 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 C19orf67A6NJJ6 358 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 H3BMH7 237 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 MYL12BO14950 172 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 TBX1O43435 398 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 CTNSO60931 367 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 STX11O75558 287 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 RAB36O95755 333 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 GKN3PP0CG01 181 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 IFNGR2P38484 337 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 RFX3P48380 749 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 EMDP50402 254 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 STX4Q12846 297 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 MAP4K2Q12851 820 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 TSPAN31Q12999 210 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 C1DQ13901 141 aaKnown RBP17.72■□□□□ 0.43
MMP28-204ENST00000615136 GALNT12Q8IXK2 581 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 RNF31Q96EP0 1072 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 PHOX2BQ99453 314 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 SAP130Q9H0E3 1048 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 PRTFDC1Q9NRG1 225 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 CNIH4Q9P003 139 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 STUB1Q9UNE7 303 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 SATB2Q9UPW6 733 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 CRYBB2P43320 205 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 GAS1P54826 345 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 IGLV3-21P80748 117 aaPredicted RBP17.72■□□□□ 0.43
MMP28-204ENST00000615136 WDR45BQ5MNZ6 344 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 GDF7Q7Z4P5 450 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 CCDC190Q86UF4 302 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 SDR16C5Q8N3Y7 309 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 TEX47Q8TBZ9 253 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 TMEM163Q8TC26 289 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.72■□□□□ 0.43
MMP28-204ENST00000615136 RIT1Q92963 219 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 ZDHHC12Q96GR4 267 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 AHCYL2Q96HN2 611 aaKnown RBP17.72■□□□□ 0.43
MMP28-204ENST00000615136 POLR2J2Q9GZM3 115 aaKnown RBP17.72■□□□□ 0.43
MMP28-204ENST00000615136 RAB33BQ9H082 229 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 EGLN3Q9H6Z9 239 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 SIAEQ9HAT2 523 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 FSCN3Q9NQT6 498 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 KLHL28Q9NXS3 571 aa17.72■□□□□ 0.43
MMP28-204ENST00000615136 PNMA8CA0A1B0GUJ8 204 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 PIP5K1CO60331 668 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 KCNK2O95069 426 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 NKX2-2O95096 273 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 IGKV1D-16P01601 117 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 PSMA1P25786 263 aaKnown RBP17.71■□□□□ 0.43
MMP28-204ENST00000615136 HTR2AP28223 471 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 CD1CP29017 333 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 EPHA4P54764 986 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 POU6F2P78424 691 aaPredicted RBP17.71■□□□□ 0.43
MMP28-204ENST00000615136 ST3GAL3Q11203 375 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 LARS2Q15031 903 aaKnown RBP17.71■□□□□ 0.43
MMP28-204ENST00000615136 C3orf38Q5JPI3 329 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 MRPL2Q5T653 305 aaKnown RBP17.71■□□□□ 0.43
MMP28-204ENST00000615136 SLC27A4Q6P1M0 643 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 PAQR6Q6TCH4 344 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 RASSF6Q6ZTQ3 369 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 PLEKHM3Q6ZWE6 761 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 OR6C4Q8NGE1 309 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 OR8D4Q8NGM9 314 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 OR51Q1Q8NH59 317 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 HOXB13Q92826 284 aaPredicted RBP17.71■□□□□ 0.43
MMP28-204ENST00000615136 FAM46AQ96IP4 442 aaKnown RBP17.71■□□□□ 0.43
MMP28-204ENST00000615136 ASPNQ9BXN1 380 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 FOLH1BQ9HBA9 442 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 ZNF232Q9UNY5 417 aa17.71■□□□□ 0.43
MMP28-204ENST00000615136 FITM1A5D6W6 292 aa17.71■□□□□ 0.42
MMP28-204ENST00000615136 A8MU76 341 aa17.71■□□□□ 0.42
MMP28-204ENST00000615136 ZNF670-ZNF695F2Z2N8 137 aa17.71■□□□□ 0.42
MMP28-204ENST00000615136 AP3D1O14617 1153 aa17.71■□□□□ 0.42
MMP28-204ENST00000615136 BRINP1O60477 761 aa17.71■□□□□ 0.42
MMP28-204ENST00000615136 SNX4O95219 450 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms