RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 SLC22A3O75751 556 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 H6PDO95479 791 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 ALOX5P09917 674 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 GKN3PP0CG01 181 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 PRG2P13727 222 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 CAPRIN1Q14444 709 aaKnown RBP5.14□□□□□ -1.59
CPNE3-208ENST00000614678 FLYWCH1Q4VC44 716 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 C6orf10Q5SRN2 563 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 ATG16L1Q676U5 607 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 FRRS1Q6ZNA5 592 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 LRRC34Q8IZ02 419 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 GTF2H4Q92759 462 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 TMCO6Q96DC7 493 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 RNF145Q96MT1 663 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 C7orf26Q96N11 449 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 ACTRT3Q9BYD9 372 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 TBL1XR1Q9BZK7 514 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 PIGUQ9H490 435 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 ACKR4Q9NPB9 350 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 ASIC5Q9NY37 505 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 RTTNQ86VV8 2226 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 A0A1W2PNR3 127 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 KLF11O14901 512 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 NDUFB5O43674 189 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 SUSD5O60279 629 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 EDF1O60869 148 aaKnown RBP5.14□□□□□ -1.59
CPNE3-208ENST00000614678 RAMP1O60894 148 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 SNX4O95219 450 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 HK1P19367 917 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 NCF2P19878 526 aaPredicted RBP5.14□□□□□ -1.59
CPNE3-208ENST00000614678 AQP1P29972 269 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 TMED10P49755 219 aaKnown RBP5.14□□□□□ -1.59
CPNE3-208ENST00000614678 CCR4P51679 360 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 NAA20P61599 178 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 POU6F2P78424 691 aaPredicted RBP5.14□□□□□ -1.59
CPNE3-208ENST00000614678 PRR5P85299 388 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 FOXF1Q12946 379 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 FOXD4Q12950 439 aaPredicted RBP5.14□□□□□ -1.59
CPNE3-208ENST00000614678 SAXO2Q658L1 398 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 B3GNT6Q6ZMB0 384 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 R3HCC1LQ7Z5L2 792 aaKnown RBP5.14□□□□□ -1.59
CPNE3-208ENST00000614678 GGNQ86UU5 652 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 VRK2Q86Y07 508 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 GPALPP1Q8IXQ4 340 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 OR4K17Q8NGC6 315 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 CA5BP1Q8WTZ4 195 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 TESCQ96BS2 214 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 C1GALT1C1Q96EU7 318 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 METTL2AQ96IZ6 378 aaKnown RBP5.14□□□□□ -1.59
CPNE3-208ENST00000614678 SFXN2Q96NB2 322 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 PINK1Q9BXM7 581 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 DKKL1Q9UK85 242 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 F8P00451 2351 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 CLCA1A8K7I4 914 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 HMGB1P1B2RPK0 211 aaPredicted RBP5.14□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF814B7Z6K7 855 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 E9PLN8 166 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 NPIPB9F8W1W9 429 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 TNFSF11O14788 317 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 CBR3O75828 277 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 KCNH1O95259 989 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 HOXB9P17482 250 aaPredicted RBP5.14□□□□□ -1.59
CPNE3-208ENST00000614678 PSMA4P25789 261 aaKnown RBP5.14□□□□□ -1.59
CPNE3-208ENST00000614678 KRT20P35900 424 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 POLR2JP52435 117 aaKnown RBP5.14□□□□□ -1.59
CPNE3-208ENST00000614678 MLC1Q15049 377 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 TSC22D1Q15714 1073 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 CTU2Q2VPK5 515 aaKnown RBP5.14□□□□□ -1.59
CPNE3-208ENST00000614678 AGKQ53H12 422 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 KLHL26Q53HC5 615 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 SLC30A6Q6NXT4 461 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 IFNEQ86WN2 208 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 P3H2Q8IVL5 708 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 MIER2Q8N344 545 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 CLIP4Q8N3C7 705 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 ROBO4Q8WZ75 1007 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 CNOT9Q92600 299 aaKnown RBP5.14□□□□□ -1.59
CPNE3-208ENST00000614678 MTERF3Q96E29 417 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 SLC35G5Q96KT7 338 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 VKORC1Q9BQB6 163 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 SRXN1Q9BYN0 137 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 PAIP1Q9H074 479 aaKnown RBP5.14□□□□□ -1.59
CPNE3-208ENST00000614678 VIPAS39Q9H9C1 493 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 C3orf14Q9HBI5 128 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 ICAM5Q9UMF0 924 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 CFL2Q9Y281 166 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 L3MBTL1Q9Y468 752 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 USF3Q68DE3 2245 aa5.14□□□□□ -1.59
CPNE3-208ENST00000614678 A0A1B0GUH1 482 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 A0A1W2PPR1 153 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 EPPINO95925 133 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 MAPK1P28482 360 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 CHI3L1P36222 383 aaPredicted RBP5.13□□□□□ -1.59
CPNE3-208ENST00000614678 DCAF7P61962 342 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 ZNHIT3Q15649 155 aaPredicted RBP5.13□□□□□ -1.59
CPNE3-208ENST00000614678 POU5F2Q8N7G0 328 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 CEP70Q8NHQ1 597 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 ZFP90Q8TF47 636 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 BTBD2Q9BX70 525 aa5.13□□□□□ -1.59
CPNE3-208ENST00000614678 OR11A1Q9GZK7 315 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms