RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 LIN28AQ9H9Z2 209 aaKnown RBP18.98■□□□□ 0.63
CTDP1-208ENST00000613122 THAP10Q9P2Z0 257 aaPredicted RBP18.98■□□□□ 0.63
CTDP1-208ENST00000613122 GABARAPL2P60520 117 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 Q8N402 240 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 TWSG1Q9GZX9 223 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 SLC6A5Q9Y345 797 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 RAB38P57729 211 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 PAQR9Q6ZVX9 377 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 TSPYL5Q86VY4 417 aaPredicted RBP18.97■□□□□ 0.63
CTDP1-208ENST00000613122 OR9Q2Q8NGE9 314 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 NPRL2Q8WTW4 380 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 ZMYND19Q96E35 227 aaPredicted RBP18.97■□□□□ 0.63
CTDP1-208ENST00000613122 DYNLRB1Q9NP97 96 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 ACOT13Q9NPJ3 140 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 CACNG3O60359 315 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 OPN1LWP04000 364 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 RGS19P49795 217 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 GK3PQ14409 553 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 PAGE3Q5JUK9 113 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 CYB561A3Q8NBI2 242 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 OR5H2Q8NGV7 314 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 RRNAD1Q96FB5 475 aaKnown RBP18.97■□□□□ 0.63
CTDP1-208ENST00000613122 PAPOLGQ9BWT3 736 aaKnown RBP18.97■□□□□ 0.63
CTDP1-208ENST00000613122 IFNA2P01563 188 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 WBP2NLQ6ICG8 309 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 CPOQ8IVL8 374 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 KIF13AQ9H1H9 1805 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 GALR3O60755 368 aaPredicted RBP18.97■□□□□ 0.63
CTDP1-208ENST00000613122 RNASE10Q5GAN6 216 aaKnown RBP18.97■□□□□ 0.63
CTDP1-208ENST00000613122 OR7D2Q96RA2 312 aa18.97■□□□□ 0.63
CTDP1-208ENST00000613122 TMEM151AQ8N4L1 468 aa18.96■□□□□ 0.63
CTDP1-208ENST00000613122 PTGER1P34995 402 aa18.96■□□□□ 0.63
CTDP1-208ENST00000613122 DCTP40126 519 aa18.96■□□□□ 0.63
CTDP1-208ENST00000613122 OR5L1Q8NGL2 311 aa18.96■□□□□ 0.63
CTDP1-208ENST00000613122 POLHQ9Y253 713 aa18.96■□□□□ 0.63
CTDP1-208ENST00000613122 MYH6P13533 1939 aa18.96■□□□□ 0.63
CTDP1-208ENST00000613122 CRTAPO75718 401 aaPredicted RBP18.96■□□□□ 0.63
CTDP1-208ENST00000613122 HSD17B7P56937 341 aa18.96■□□□□ 0.63
CTDP1-208ENST00000613122 PPA1Q15181 289 aa18.96■□□□□ 0.63
CTDP1-208ENST00000613122 GRAMD2AQ8IUY3 354 aa18.96■□□□□ 0.63
CTDP1-208ENST00000613122 SDR9C7Q8NEX9 313 aa18.96■□□□□ 0.63
CTDP1-208ENST00000613122 LMF1Q96S06 567 aa18.96■□□□□ 0.63
CTDP1-208ENST00000613122 MAT1AQ00266 395 aaKnown RBP18.96■□□□□ 0.63
CTDP1-208ENST00000613122 FER1L6-AS2Q96M78 137 aa18.96■□□□□ 0.63
CTDP1-208ENST00000613122 ATXN1LP0C7T5 689 aaKnown RBP18.95■□□□□ 0.62
CTDP1-208ENST00000613122 TCN2P20062 427 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 PRDX3P30048 256 aaKnown RBP18.95■□□□□ 0.62
CTDP1-208ENST00000613122 WDR53Q7Z5U6 358 aaPredicted RBP18.95■□□□□ 0.62
CTDP1-208ENST00000613122 HAVCR2Q8TDQ0 301 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 MUCL1Q96DR8 90 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 PRRC1Q96M27 445 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 NGBQ9NPG2 151 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 ZNF443Q9Y2A4 671 aaPredicted RBP18.95■□□□□ 0.62
CTDP1-208ENST00000613122 LCKP06239 509 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 PHC1P78364 1004 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 ADAMTSL4Q6UY14 1074 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 PIAS4Q8N2W9 510 aaPredicted RBP18.95■□□□□ 0.62
CTDP1-208ENST00000613122 DEFB123Q8N688 67 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 COQ8AQ8NI60 647 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 MITFO75030 526 aaPredicted RBP18.95■□□□□ 0.62
CTDP1-208ENST00000613122 HOXA9P31269 272 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 CHRNEQ04844 493 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 OR5M10Q6IEU7 315 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 SERPINA11Q86U17 422 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 OR6Q1Q8NGQ2 317 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 SYT3Q9BQG1 590 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 NXT1Q9UKK6 140 aaKnown RBP18.95■□□□□ 0.62
CTDP1-208ENST00000613122 SLC1A7O00341 560 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 DMWDQ09019 674 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 MMP21Q8N119 569 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 BMP4P12644 408 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 RAB3AP20336 220 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 MAGEA6P43360 314 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 SSR4P51571 173 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 ERVK-25P63136 954 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 RACK1P63244 317 aaKnown RBP18.95■□□□□ 0.62
CTDP1-208ENST00000613122 C6orf89Q6UWU4 347 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 MLXQ9UH92 298 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 PCDHGA7Q9Y5G6 932 aa18.95■□□□□ 0.62
CTDP1-208ENST00000613122 NARSO43776 548 aaKnown RBP18.94■□□□□ 0.62
CTDP1-208ENST00000613122 SLC2A12Q8TD20 617 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 CHPT1Q8WUD6 406 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 RSC1A1Q92681 617 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 ZNF300Q96RE9 604 aaPredicted RBP18.94■□□□□ 0.62
CTDP1-208ENST00000613122 ALG8Q9BVK2 526 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 PCBD1P61457 104 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 PKDCCQ504Y2 493 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 TP53I3Q53FA7 332 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 OR1J4Q8NGS1 313 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 BPIFA2Q96DR5 249 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 INTS14Q96SY0 518 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 AGAP5A6NIR3 686 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 C12orf71A8MTZ7 269 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 ABLIM3O94929 683 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 PTHP01270 115 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 AKR1C4P17516 323 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 LSSP48449 732 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 CCNJQ5T5M9 372 aa18.94■□□□□ 0.62
CTDP1-208ENST00000613122 PDLIM5Q96HC4 596 aaKnown RBP18.94■□□□□ 0.62
CTDP1-208ENST00000613122 SLC6A18Q96N87 628 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms