RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 CSNK1A1LQ8N752 337 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 AVL9Q8NBF6 648 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 CYB561A3Q8NBI2 242 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 OR51A7Q8NH64 312 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 SLC22A18Q96BI1 424 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 KATNB1Q9BVA0 655 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 LMAN2LQ9H0V9 348 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 OR52D1Q9H346 318 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 UBQLN3Q9H347 655 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 SP140LQ9H930 580 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 IL21RQ9HBE5 538 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 IL20Q9NYY1 176 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 HCN3Q9P1Z3 774 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 MSRAQ9UJ68 235 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 TFECO14948 347 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 APBB3O95704 486 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 IGHV4-34P06331 123 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 TBXA2RP21731 343 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 TLX1P31314 330 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 SLC16A1P53985 500 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 FZD5Q13467 585 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 LRIT3Q3SXY7 679 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 KLHL12Q53G59 568 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 ZNF362Q5T0B9 420 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 TAF8Q7Z7C8 310 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 MRGPREQ86SM8 312 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 CNOT9Q92600 299 aaKnown RBP13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 SLC25A46Q96AG3 418 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 ZNF649Q9BS31 505 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 CALML5Q9NZT1 146 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 COMMD3Q9UBI1 195 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 C19orf53Q9UNZ5 99 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 SIRT4Q9Y6E7 314 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 ALPK2Q86TB3 2170 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 A0A075B6Q4 140 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 ISPDA4D126 451 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 DUXAA6NLW8 204 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 B4DGG1 531 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 TGFBR3LH3BV60 316 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 TNFSF14O43557 240 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 SEMA4FO95754 770 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 NOS3P29474 1203 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 IFNGR2P38484 337 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 MGAT2Q10469 447 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 CDC20Q12834 499 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 FAM53BQ14153 422 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 PRICKLE4Q2TBC4 344 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 SLC25A30Q5SVS4 291 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 PRAMEF8Q5VWM4 474 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 PRAMEF7Q5VXH5 474 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 FAM131AQ6UXB0 335 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 ABHD13Q7L211 337 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 CA13Q8N1Q1 262 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 LINC00471Q8N535 108 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 TMEM99Q8N816 258 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 CAMKVQ8NCB2 501 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 BAHD1Q8TBE0 780 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 ZNF350Q9GZX5 532 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 MMP28Q9H239 520 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 FGF20Q9NP95 211 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 CLCA3PQ9Y6N3 262 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 SEC16AO15027 2179 aa13.07□□□□□ -0.32
PCDHGA3-202ENST00000612467 A0A1W2PQ09 198 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 LRRN3E7EW58 273 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 MAGEB4O15481 346 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 EMDP50402 254 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 RUNX1T1Q06455 604 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 EIF2B5Q13144 721 aaKnown RBP13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 VASNQ6EMK4 673 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 TRIM69Q86WT6 500 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 ZNF485Q8NCK3 441 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 OR52R1Q8NGF1 315 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 TP53INP1Q96A56 240 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 ARHGAP9Q9BRR9 750 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 LRRN3Q9H3W5 708 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 PIGUQ9H490 435 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 CPNE5Q9HCH3 593 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 CRNNQ9UBG3 495 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 CMAHPQ9Y471 501 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 UGT2A1Q9Y4X1 527 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 LRP4O75096 1905 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 DMDP11532 3685 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 A0A0A6YYC8 382 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 SHISA7A6NL88 538 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 I3L1I5 382 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 ZNF24P17028 368 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 ETV6P41212 452 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 RFX2P48378 723 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 TMED10P49755 219 aaKnown RBP13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 PLK5Q496M5 336 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 GXYLT1Q4G148 440 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 PDZK1Q5T2W1 519 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 CXXC5Q7LFL8 322 aaKnown RBP13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 GLCCI1Q86VQ1 547 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 GATAD2AQ86YP4 633 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 ZNF619Q8N2I2 560 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 OR2T33Q8NG76 320 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 FANK1Q8TC84 345 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 OSTF1Q92882 214 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 UFD1Q92890 307 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms