RNA–Protein interactions for RNA: ENST00000611481.1

LINC00540-201, long intergenic non-protein coding RNA 540, humanhuman

TSL 4

Gene LINC00540, Length 588 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-201ENST00000611481 MOV10Q9HCE1 1003 aaKnown RBP3.88□□□□□ -1.79
LINC00540-201ENST00000611481 IMP3Q9NV31 184 aaKnown RBP3.88□□□□□ -1.79
LINC00540-201ENST00000611481 ATAD3AQ9NVI7 634 aa3.88□□□□□ -1.79
LINC00540-201ENST00000611481 TMEM248Q9NWD8 314 aa3.88□□□□□ -1.79
LINC00540-201ENST00000611481 ARL15Q9NXU5 204 aa3.88□□□□□ -1.79
LINC00540-201ENST00000611481 UPB1Q9UBR1 384 aa3.88□□□□□ -1.79
LINC00540-201ENST00000611481 KIAA1257Q9ULG3 409 aa3.88□□□□□ -1.79
LINC00540-201ENST00000611481 ICAM5Q9UMF0 924 aa3.88□□□□□ -1.79
LINC00540-201ENST00000611481 PSMD13Q9UNM6 376 aa3.88□□□□□ -1.79
LINC00540-201ENST00000611481 FAM96BQ9Y3D0 163 aa3.88□□□□□ -1.79
LINC00540-201ENST00000611481 STRAPQ9Y3F4 350 aaKnown RBP3.88□□□□□ -1.79
LINC00540-201ENST00000611481 MAU2Q9Y6X3 613 aa3.88□□□□□ -1.79
LINC00540-201ENST00000611481 EML6Q6ZMW3 1958 aa3.88□□□□□ -1.79
LINC00540-201ENST00000611481 YLPM1P49750 1951 aaKnown RBP3.87□□□□□ -1.79
LINC00540-201ENST00000611481 A0A087WYN8 130 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 A0A096LNT2 108 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.87□□□□□ -1.79
LINC00540-201ENST00000611481 NPIPB11E5RHQ5 1161 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 KLRC4-KLRK1H3BQV0 150 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 IFNL4K9M1U5 179 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 KMOO15229 486 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 OGG1O15527 345 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 HSF2BPO75031 334 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 WDR1O75083 606 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 RLN1P04808 185 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 ALDOCP09972 364 aaKnown RBP3.87□□□□□ -1.79
LINC00540-201ENST00000611481 LINGO3P0C6S8 592 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 ICAM2P13598 275 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 KRT5P13647 590 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 IL7RP16871 459 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 VCLP18206 1134 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 EPORP19235 508 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 CCNCP24863 283 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 AGTR2P50052 363 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 EMP2P54851 167 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 SH3BGRP55822 239 aaPredicted RBP3.87□□□□□ -1.79
LINC00540-201ENST00000611481 SLC37A1P57057 533 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 RPS4XP62701 263 aaKnown RBP3.87□□□□□ -1.79
LINC00540-201ENST00000611481 CUL2Q13617 745 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 ME3Q16798 604 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 MEP1AQ16819 746 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 LRRC66Q68CR7 880 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 DNM1P46Q6ZS02 220 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 ABHD13Q7L211 337 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.87□□□□□ -1.792e-6■■■■■ 163.7
LINC00540-201ENST00000611481 ADGRF3Q8IZF5 1079 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 SCAIQ8N9R8 606 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 OCC1Q8TAD7 63 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 TUBGCP3Q96CW5 907 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 SPACA9Q96E40 222 aaPredicted RBP3.87□□□□□ -1.79
LINC00540-201ENST00000611481 EPSTI1Q96J88 318 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 CAPZA3Q96KX2 299 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 ART5Q96L15 291 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 SMIM14Q96QK8 99 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 NPAS2Q99743 824 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 TIMM29Q9BSF4 260 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 ANGPTL4Q9BY76 406 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 PITPNM3Q9BZ71 974 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 RTN4RQ9BZR6 473 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 RIBC2Q9H4K1 309 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 KCNK13Q9HB14 408 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 SERINC1Q9NRX5 453 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 FAM207AQ9NSI2 230 aaPredicted RBP3.87□□□□□ -1.79
LINC00540-201ENST00000611481 ABHD10Q9NUJ1 306 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 SLC24A2Q9UI40 661 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 SMC3Q9UQE7 1217 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 LAMP3Q9UQV4 416 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 R3HDM2Q9Y2K5 976 aaKnown RBP3.87□□□□□ -1.79
LINC00540-201ENST00000611481 TEX264Q9Y6I9 313 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 DNAH1Q9P2D7 4330 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 KIAA1549Q9HCM3 1950 aa3.87□□□□□ -1.79
LINC00540-201ENST00000611481 TRBV2A0A0J9YWF9 115 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 RBMY1BA6NDE4 496 aaKnown RBP3.86□□□□□ -1.79
LINC00540-201ENST00000611481 RBMY1EA6NEQ0 496 aaKnown RBP3.86□□□□□ -1.79
LINC00540-201ENST00000611481 C5orf52A6NGY3 159 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 FAM166BA8MTA8 275 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 MCIDASD6RGH6 385 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 SLCO1B7G3V0H7 640 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 GOLGA8SH3BPF8 625 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 TRIM77I1YAP6 450 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 BTN3A3O00478 584 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 CHUKO15111 745 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 KLRC4O43908 158 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 MT-CYBP00156 380 aaPredicted RBP3.86□□□□□ -1.79
LINC00540-201ENST00000611481 IGHV4-39P01824 125 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 PRB2P02812 416 aaPredicted RBP3.86□□□□□ -1.79
LINC00540-201ENST00000611481 ACAA1P09110 424 aaPredicted RBP3.86□□□□□ -1.79
LINC00540-201ENST00000611481 PAEPP09466 180 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 RBMY1DP0C7P1 496 aaKnown RBP3.86□□□□□ -1.79
LINC00540-201ENST00000611481 TPBGLP0DKB5 382 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 PRG2P13727 222 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 ANXA7P20073 488 aaKnown RBP3.86□□□□□ -1.79
LINC00540-201ENST00000611481 DPP4P27487 766 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 ACADLP28330 430 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 TYK2P29597 1187 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 GTF2H1P32780 548 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 CDKN1AP38936 164 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 MDH1P40925 334 aaKnown RBP3.86□□□□□ -1.79
LINC00540-201ENST00000611481 KCNJ1P48048 391 aa3.86□□□□□ -1.79
LINC00540-201ENST00000611481 GABRA4P48169 554 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms