RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 DNAJB12Q9NXW2 375 aaKnown RBP19.89■□□□□ 0.77
USP6NL-204ENST00000606752 TRAPPC13A5PLN9 417 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 SERINC4A6NH21 518 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 CSO75390 466 aaKnown RBP19.88■□□□□ 0.77
USP6NL-204ENST00000606752 MT-CO3P00414 261 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 SMIM18P0DKX4 95 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 TGM1P22735 817 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 HTR2AP28223 471 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 ESRRGP62508 458 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 RNF4P78317 190 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 CD47Q08722 323 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 OR1Q1Q15612 314 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 SLCO6A1Q86UG4 719 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 ZNF527Q8NB42 609 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 ZNF559Q9BR84 538 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 OTOGLQ3ZCN5 2332 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 KIF26BQ2KJY2 2108 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 TEX51A0A1B0GUA7 166 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 REM1O75628 298 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 IFNGR2P38484 337 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 CLDN6P56747 220 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 PSPHP78330 225 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 C1orf94Q6P1W5 598 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 HSDL2Q6YN16 418 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 ZNF730Q6ZMV8 503 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 RRM2BQ7LG56 351 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 ZER1Q7Z7L7 766 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 PIP4P1Q86T03 277 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 ACOT11Q8WXI4 607 aaPredicted RBP19.88■□□□□ 0.77
USP6NL-204ENST00000606752 TP53INP1Q96A56 240 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 PISDQ9UG56 409 aa19.88■□□□□ 0.77
USP6NL-204ENST00000606752 ZNF223Q9UK11 482 aaPredicted RBP19.88■□□□□ 0.77
USP6NL-204ENST00000606752 CDC14CA4D256 554 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 ABCB7O75027 752 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 STK17BO94768 372 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 UTS2O95399 124 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 JMJD7P0C870 316 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 HPGDP15428 266 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 ELK4P28324 431 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 KRT20P35900 424 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 ADH7P40394 386 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 IL5RAQ01344 420 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 COX10Q12887 443 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 NCF4Q15080 339 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 TRIP6Q15654 476 aaKnown RBP19.87■□□□□ 0.77
USP6NL-204ENST00000606752 MEP1AQ16819 746 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 CD300LDQ6UXZ3 194 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 ZNF550Q7Z398 422 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 NKAIN4Q8IVV8 208 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 SLC34A3Q8N130 599 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 TSPAN14Q8NG11 270 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 FBLIM1Q8WUP2 373 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 VMP1Q96GC9 406 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 ADOQ96SZ5 270 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 DDA1Q9BW61 102 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 TMEM27Q9HBJ8 222 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 REV1Q9UBZ9 1251 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 SLC7A7Q9UM01 511 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 SLC35A3Q9Y2D2 325 aa19.87■□□□□ 0.77
USP6NL-204ENST00000606752 TRIM64A6NGJ6 449 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 KLF7O75840 302 aaPredicted RBP19.86■□□□□ 0.77
USP6NL-204ENST00000606752 CSTAP01040 98 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 OSMP13725 252 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 TBXA2RP21731 343 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 MMP11P24347 488 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 ACAA2P42765 397 aaKnown RBP19.86■□□□□ 0.77
USP6NL-204ENST00000606752 LSM11P83369 360 aaKnown RBP eCLIP19.86■□□□□ 0.773e-6■■□□□ 12.8
USP6NL-204ENST00000606752 CTU2Q2VPK5 515 aaKnown RBP19.86■□□□□ 0.77
USP6NL-204ENST00000606752 C6orf141Q5SZD1 244 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 ZNF613Q6PF04 617 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 PRR22Q8IZ63 422 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 C8orf44Q96CB5 159 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 LRFN3Q9BTN0 628 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 MRPS26Q9BYN8 205 aaKnown RBP19.86■□□□□ 0.77
USP6NL-204ENST00000606752 PTRH2Q9Y3E5 179 aaKnown RBP19.86■□□□□ 0.77
USP6NL-204ENST00000606752 PCDHGA6Q9Y5G7 932 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 LOC102723996A0A087X1L8 192 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 SCDO00767 359 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 TSPAN2O60636 221 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 IL12BP29460 328 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 GGT2P36268 569 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 CRISP1P54107 249 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 PLCXD2Q0VAA5 305 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 EIF3IQ13347 325 aaKnown RBP19.86■□□□□ 0.77
USP6NL-204ENST00000606752 DHRS13Q6UX07 377 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 Q6ZPB1 254 aaPredicted RBP19.86■□□□□ 0.77
USP6NL-204ENST00000606752 GLRX5Q86SX6 157 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 AMER2Q8N7J2 671 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 NUBPLQ8TB37 319 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 HDAC2Q92769 488 aaKnown RBP19.86■□□□□ 0.77
USP6NL-204ENST00000606752 DEPDC7Q96QD5 511 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 COL25A1Q9BXS0 654 aaPredicted RBP19.86■□□□□ 0.77
USP6NL-204ENST00000606752 FLRT3Q9NZU0 649 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 PADI1Q9ULC6 663 aa19.86■□□□□ 0.77
USP6NL-204ENST00000606752 A6NHS1 94 aa19.85■□□□□ 0.77
USP6NL-204ENST00000606752 PLD2O14939 933 aa19.85■□□□□ 0.77
USP6NL-204ENST00000606752 CLPTM1O96005 669 aa19.85■□□□□ 0.77
USP6NL-204ENST00000606752 CD63P08962 238 aa19.85■□□□□ 0.77
USP6NL-204ENST00000606752 CHMP24386 653 aa19.85■□□□□ 0.77
USP6NL-204ENST00000606752 ABCD3P28288 659 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms