RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 PIGQQ9BRB3 760 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 INPP5KQ9BT40 448 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 CALHM2Q9HA72 323 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 BTNL2Q9UIR0 455 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 IGLV3-32A0A0A0MS00 114 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 OR2M5A3KFT3 312 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 CCDC154A6NI56 674 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 GTPBP1O00178 669 aaKnown RBP13.03□□□□□ -0.32
TUBE1-208ENST00000604743 POLR3GO15318 223 aaPredicted RBP13.03□□□□□ -0.32
TUBE1-208ENST00000604743 HCRTR2O43614 444 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 C1QCP02747 245 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 PEPDP12955 493 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 PRF1P14222 555 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 ZNF708P17019 499 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 CEACAM8P31997 349 aaPredicted RBP13.03□□□□□ -0.32
TUBE1-208ENST00000604743 TIMP3P35625 211 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 CDKN2CP42773 168 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 ZNF41P51814 821 aaPredicted RBP13.03□□□□□ -0.32
TUBE1-208ENST00000604743 ATP12AP54707 1039 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 GSTA3Q16772 222 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 SAXO2Q658L1 398 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 MISPQ8IVT2 679 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 C9orf106Q8NAJ2 232 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 GLB1L3Q8NCI6 653 aaPredicted RBP13.03□□□□□ -0.32
TUBE1-208ENST00000604743 OR9I1Q8NGQ6 314 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 B4GALNT2Q8NHY0 566 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 RFWD2Q8NHY2 731 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 THOC1Q96FV9 657 aaKnown RBP13.03□□□□□ -0.32
TUBE1-208ENST00000604743 KLHDC3Q9BQ90 382 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 EBF4Q9BQW3 602 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 HOXD1Q9GZZ0 328 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 EXD2Q9NVH0 621 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 MKLN1Q9UL63 735 aa13.03□□□□□ -0.32
TUBE1-208ENST00000604743 A0A1W2PQD3 144 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 CD8B2A6NJW9 211 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 H0YC42 278 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 H3BNH8 94 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 DVL2O14641 736 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 OIP5O43482 229 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 FCMRO60667 390 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 NUDT14O95848 222 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 OPN1LWP04000 364 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 IL6P05231 212 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 MSX1P28360 303 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 KHKP50053 298 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 IDH3AP50213 366 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 ZNF136P52737 540 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 AQP5P55064 265 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 TPD52P55327 224 aaPredicted RBP13.02□□□□□ -0.33
TUBE1-208ENST00000604743 ZNF117Q03924 483 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 TFF3Q07654 80 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 NDUFAF6Q330K2 333 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.02□□□□□ -0.33
TUBE1-208ENST00000604743 PDZK1Q5T2W1 519 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 ATAD3BQ5T9A4 648 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 DNAJC14Q6Y2X3 702 aaPredicted RBP13.02□□□□□ -0.33
TUBE1-208ENST00000604743 P4HA3Q7Z4N8 544 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 RNF130Q86XS8 419 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 GRAMD2AQ8IUY3 354 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 MIER2Q8N344 545 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 MEIOBQ8N635 442 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 TRIML2Q8N7C3 387 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 GOT1L1Q8NHS2 421 aaPredicted RBP13.02□□□□□ -0.33
TUBE1-208ENST00000604743 PNPT1Q8TCS8 783 aaKnown RBP13.02□□□□□ -0.33
TUBE1-208ENST00000604743 CKAP2Q8WWK9 683 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 NEURL3Q96EH8 262 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 NPAS1Q99742 590 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 ACBD3Q9H3P7 528 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 TCF7L2Q9NQB0 619 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 NPDC1Q9NQX5 325 aaPredicted RBP13.02□□□□□ -0.33
TUBE1-208ENST00000604743 MED17Q9NVC6 651 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 ZIM2Q9NZV7 527 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 CARD8Q9Y2G2 431 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 DTNAQ9Y4J8 743 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 ADGRG4Q8IZF6 3080 aa13.02□□□□□ -0.33
TUBE1-208ENST00000604743 MBD3L4A6NDZ8 208 aaPredicted RBP13.01□□□□□ -0.33
TUBE1-208ENST00000604743 MBD3L3A6NE82 208 aaPredicted RBP13.01□□□□□ -0.33
TUBE1-208ENST00000604743 MBD3L5A6NJ08 208 aaPredicted RBP13.01□□□□□ -0.33
TUBE1-208ENST00000604743 RFXANKO14593 260 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 TNFRSF21O75509 655 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 STX11O75558 287 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 CYP7B1O75881 506 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 TGDSO95455 350 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 ANP32DO95626 131 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 AK1P00568 194 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 TMIGD3P0DMS9 266 aaPredicted RBP13.01□□□□□ -0.33
TUBE1-208ENST00000604743 POLR2JP52435 117 aaKnown RBP13.01□□□□□ -0.33
TUBE1-208ENST00000604743 SUCLG1P53597 346 aaKnown RBP13.01□□□□□ -0.33
TUBE1-208ENST00000604743 STX1BP61266 288 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 SNTB1Q13884 538 aaKnown RBP13.01□□□□□ -0.33
TUBE1-208ENST00000604743 BCL2A1Q16548 175 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 SLC25A35Q3KQZ1 300 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 ARHGAP11BQ3KRB8 267 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 GLYR1Q49A26 553 aaPredicted RBP13.01□□□□□ -0.33
TUBE1-208ENST00000604743 TIGD2Q4W5G0 525 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 GPAT3Q53EU6 434 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 KLHL26Q53HC5 615 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 PPP4R4Q6NUP7 873 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 CBLN3Q6UW01 205 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 MTERF4Q7Z6M4 381 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms