RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 SOX17Q9H6I2 414 aaPredicted RBP11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PARD6AQ9NPB6 346 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 DNAJB12Q9NXW2 375 aaKnown RBP11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 BLOC1S6Q9UL45 172 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CENPVL1A0A0U1RR11 272 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 A8MUA0 341 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 H3BNH8 94 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SCDO00767 359 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 MPZL2O60487 215 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TPST2O60704 377 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 KLF7O75840 302 aaPredicted RBP11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 IGF2P01344 180 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 GNAO1P09471 354 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 OSMP13725 252 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CSRP1P21291 193 aaKnown RBP11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 IL12BP29460 328 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SLC6A8P48029 635 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TMED10P49755 219 aaKnown RBP11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SLC26A5P58743 744 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 GABARAPL2P60520 117 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 STPG1Q5TH74 334 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PGBD2Q6P3X8 592 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PODNL1Q6PEZ8 512 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 C6orf15Q6UXA7 325 aaPredicted RBP11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ZAR1Q86SH2 424 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PRSS58Q8IYP2 241 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 DND1Q8IYX4 353 aaKnown RBP11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 DEPDC4Q8N2C3 294 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SLC43A2Q8N370 569 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ESX1Q8N693 406 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CLDN22Q8N7P3 220 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ZNF321PQ8N8H1 164 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 AQP11Q8NBQ7 271 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 OR4K5Q8NGD3 323 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 OR52J3Q8NH60 311 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SLC41A3Q96GZ6 507 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 MUS81Q96NY9 551 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 MRPS26Q9BYN8 205 aaKnown RBP11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 UCK2Q9BZX2 261 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 C12orf10Q9HB07 376 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TMEM27Q9HBJ8 222 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PADI1Q9ULC6 663 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TMEM5Q9Y2B1 443 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 B3GALT1Q9Y5Z6 326 aa11.32□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 A0A0B4J2E0 115 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 A0A1B0GX12 115 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TRIM64CA6NLI5 447 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 C21orf140B9A014 251 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ALG1L2C9J202 215 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CHP2O43745 196 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 OR10H3O60404 316 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 EIF4E2O60573 245 aaKnown RBP11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 MRPS14O60783 128 aaKnown RBP11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ZFAND5O76080 213 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 UTS2O95399 124 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CSTAP01040 98 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CCDC159P0C7I6 412 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 UBTFL6P0CB48 400 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 HPGDP15428 266 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 MMP11P24347 488 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 FPR3P25089 353 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CD82P27701 267 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ABCD3P28288 659 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 GGT2P36268 569 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 FOLR3P41439 243 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TPD52P55327 224 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ISL1P61371 349 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PLAURQ03405 335 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PLCXD2Q0VAA5 305 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TSPAN31Q12999 210 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 APOFQ13790 326 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 LAPTM4AQ15012 233 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SEC23BQ15437 767 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ZIK1Q3SY52 487 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 LCN10Q6JVE6 187 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TTC33Q6PID6 262 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 MBOAT2Q6ZWT7 520 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 RRM2BQ7LG56 351 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 NUP54Q7Z3B4 507 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 GDF7Q7Z4P5 450 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ARMC10Q8N2F6 343 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 OR9Q2Q8NGE9 314 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PIGXQ8TBF5 258 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 M1APQ8TC57 530 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 GNPDA2Q8TDQ7 276 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 RNF138Q8WVD3 245 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 DNAJA4Q8WW22 397 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TTC9Q92623 222 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 GAL3ST4Q96RP7 486 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 NIPSNAP1Q9BPW8 284 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ZNF426Q9BUY5 554 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 COL25A1Q9BXS0 654 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 GPR87Q9BY21 358 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ING2Q9H160 280 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 RIBC2Q9H4K1 309 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 RLIMQ9NVW2 624 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 RHCGQ9UBD6 479 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ZNF223Q9UK11 482 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 GMPPBQ9Y5P6 360 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 VPS13AQ96RL7 3174 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms