RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 COL9A1P20849 921 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 KIAA0040Q15053 153 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 MLIPQ5VWP3 458 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 C5orf46Q6UWT4 87 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 STX12Q86Y82 276 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 TMEM163Q8TC26 289 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 DOK4Q8TEW6 326 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 SFT2D1Q8WV19 159 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 SGK3Q96BR1 496 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 DTD2Q96FN9 168 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 CLMPQ9H6B4 373 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 KCNK12Q9HB15 430 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 NUDT4Q9NZJ9 180 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 MIOXQ9UGB7 285 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 FZD4Q9ULV1 537 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 OR10H1Q9Y4A9 318 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 GVINP1Q7Z2Y8 2422 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 SH3D21A4FU49 640 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 C2CD4DB7Z1M9 353 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 AIPO00170 330 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 RNF224P0DH78 156 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 LTBRP36941 435 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 STARP49675 285 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 LIMK1P53667 647 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 TSC22D1Q15714 1073 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 HFEQ30201 348 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 HENMT1Q5T8I9 393 aaKnown RBP14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 HIST2H2AA3Q6FI13 130 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 UNC5DQ6UXZ4 953 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 MAMSTRQ6ZN01 415 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 CALHM3Q86XJ0 350 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 SYNPOQ8N3V7 929 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 IQCF1Q8N6M8 205 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 CCL4L1Q8NHW4 92 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 WFIKKN2Q8TEU8 576 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 POP5Q969H6 163 aaKnown RBP14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 ARL5BQ96KC2 179 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 PKP4Q99569 1192 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 C2orf42Q9NWW7 574 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 TINAGQ9UJW2 476 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 FEZF1A0PJY2 475 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 D6RAR5 112 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 MPZL2O60487 215 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 MT-ND4P03905 459 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 MLLT11Q13015 90 aaPredicted RBP14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 RBMS2Q15434 407 aaKnown RBP14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 ENPP7Q6UWV6 458 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 MACC1Q6ZN28 852 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 KRT78Q8N1N4 520 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 FAM181AQ8N9Y4 354 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 DNAJB8Q8NHS0 232 aa14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 WDR77Q9BQA1 342 aaPredicted RBP14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 STOX2Q9P2F5 926 aaPredicted RBP14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 ZFR2Q9UPR6 939 aaKnown RBP14.38□□□□□ -0.11
PPFIA3-206ENST00000602655 CTHP32929 405 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 DRD3P35462 400 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 SUOXP51687 545 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 PPP2CBP62714 309 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 PPP2CAP67775 309 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 SLC25A25Q6KCM7 469 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 SYT12Q8IV01 421 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 SLC30A8Q8IWU4 369 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 OR52N1Q8NH53 320 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 PDXPQ96GD0 296 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 OR4K3Q96R72 315 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 ADAT1Q9BUB4 502 aaKnown RBP14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 TPT1P8Q9HAU6 139 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 SGK2Q9HBY8 427 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 SLC6A5Q9Y345 797 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 RIF1Q5UIP0 2472 aaKnown RBP14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 A0A1B0GW55 424 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 EIF3GO75821 320 aaKnown RBP eCLIP14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 CLDN9O95484 217 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 DUX4L2P0CJ85 424 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 DUX4L3P0CJ86 424 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 DUX4L4P0CJ87 422 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 DUX4L5P0CJ88 424 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 DUX4L6P0CJ89 424 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 DUX4L7P0CJ90 424 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 CSNK1DP48730 415 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 SMCO1Q147U7 214 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 NHLRC3Q5JS37 347 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 FAM74A1Q5RGS3 127 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 ZNF425Q6IV72 752 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 CBLN2Q8IUK8 224 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 DOHHQ9BU89 302 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 SPHK1Q9NYA1 384 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 NDUFAF4Q9P032 175 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 DUX4Q9UBX2 424 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 CYP8B1Q9UNU6 501 aa14.37□□□□□ -0.11
PPFIA3-206ENST00000602655 TCRBV21S2A2A0A5A6 115 aa14.36□□□□□ -0.11
PPFIA3-206ENST00000602655 LY86O95711 162 aa14.36□□□□□ -0.11
PPFIA3-206ENST00000602655 SRPRAP08240 638 aaKnown RBP14.36□□□□□ -0.11
PPFIA3-206ENST00000602655 CD9P21926 228 aa14.36□□□□□ -0.11
PPFIA3-206ENST00000602655 NFYAP23511 347 aaPredicted RBP14.36□□□□□ -0.11
PPFIA3-206ENST00000602655 SNRPEP62304 92 aaKnown RBP14.36□□□□□ -0.11
PPFIA3-206ENST00000602655 SERTAD2Q14140 314 aa14.36□□□□□ -0.11
PPFIA3-206ENST00000602655 C19orf48Q6RUI8 117 aa14.36□□□□□ -0.11
PPFIA3-206ENST00000602655 TRAM1L1Q8N609 369 aa14.36□□□□□ -0.11
PPFIA3-206ENST00000602655 PROKR2Q8NFJ6 384 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms