RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 GTPBP1O00178 669 aaKnown RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 DVL1O14640 695 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 GALR2O43603 387 aaPredicted RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 SH3BGRLO75368 114 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 OR4F21O95013 312 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 NME1P15531 152 aaKnown RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 PRDX5P30044 214 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 CEACAM8P31997 349 aaPredicted RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 MAPK8P45983 427 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 METAP1P53582 386 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 ITGA1P56199 1179 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 ZP1P60852 638 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 SEC61A1P61619 476 aaKnown RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 SIGLEC14Q08ET2 396 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 CRHR2Q13324 411 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 HEPACAMQ14CZ8 416 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 TSTQ16762 297 aaKnown RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 OR4F3Q6IEY1 312 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 FIGNL1Q6PIW4 674 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 C1orf186Q6ZWK4 172 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 MFSD6LQ8IWD5 586 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 FAM89BQ8N5H3 189 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 RDM1Q8NG50 284 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 OR56B1Q8NGI3 324 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 OR13C2Q8NGS9 318 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 OR4C6Q8NH72 309 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 KCNE4Q8WWG9 221 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 ISG20Q96AZ6 181 aaKnown RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 C14orf79Q96F83 325 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 DDOQ99489 341 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 CNPPD1Q9BV87 410 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 FGFBP2Q9BYJ0 223 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 DPH1Q9BZG8 443 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 ACTR3CQ9C0K3 210 aaPredicted RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 CRISPLD2Q9H0B8 497 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 TKTL2Q9H0I9 626 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 ACTL8Q9H568 366 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 MEAF6Q9HAF1 191 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 MYNNQ9NPC7 610 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 CXXC1Q9P0U4 656 aaPredicted RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 SLC5A6Q9Y289 635 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 NRAPQ86VF7 1730 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 ABCA3Q99758 1704 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 UBA6A0AVT1 1052 aaPredicted RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 USP17L3A6NCW0 530 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 EMC8O43402 210 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 TGOLN2O43493 480 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 KDELR3O43731 214 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 SRPX2O60687 465 aaPredicted RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 OR2J2O76002 312 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 ANXA9O76027 345 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 ALDOBP05062 364 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 PSAPP07602 524 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 SNHG28P0DPA3 235 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 CD1BP29016 333 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 MC5RP33032 325 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 NAA10P41227 235 aaPredicted RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 GPM6BQ13491 265 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 JOSD1Q15040 202 aaPredicted RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 NOL9Q5SY16 702 aaKnown RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 STEAP4Q687X5 459 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 CXorf57Q6NSI4 855 aaKnown RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 ZNF620Q6ZNG0 422 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 NDUFAF7Q7L592 441 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 PDZD3Q86UT5 571 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 LRRC52Q8N7C0 313 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 DNAJC5GQ8N7S2 189 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 GPR26Q8NDV2 337 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 FAM71CQ8NEG0 241 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 TMEM185AQ8NFB2 350 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 DNERQ8NFT8 737 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 OR10D4PQ8NGN7 298 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 RNASEH2CQ8TDP1 164 aaKnown RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 SMPDL3AQ92484 453 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 FBXO17Q96EF6 278 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 ARSGQ96EG1 525 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 CDCA4Q9BXL8 241 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 BCO2Q9BYV7 579 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 MAGIXQ9H6Y5 334 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 PLAC1Q9HBJ0 212 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 LRFN1Q9P244 771 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 KCND3Q9UK17 655 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 SLC7A11Q9UPY5 501 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 SNED1Q8TER0 1413 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 hCG_1818297A0A087WSY0 165 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 CASKO14936 926 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 SCN2BO60939 215 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 FZD7O75084 574 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 CILPO75339 1184 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 OR2A4O95047 310 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 PMP2P02689 132 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 CPN1P15169 458 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 IL1RNP18510 177 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 HTR2CP28335 458 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 DCTP40126 519 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 MRPL19P49406 292 aaKnown RBP8.3□□□□□ -1.08
COMMD3-215ENST00000602574 PTTG1IPP53801 180 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 TMEM33P57088 247 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 SLAQ13239 276 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 GSG1Q2KHT4 349 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms