RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 KLHL15Q96M94 604 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 AMDHD1Q96NU7 426 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 TNFRSF13CQ96RJ3 184 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 ZNF382Q96SR6 550 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 KLHDC3Q9BQ90 382 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 RAB17Q9H0T7 212 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 ACSS3Q9H6R3 686 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 TMEM160Q9NX00 188 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 SIRT5Q9NXA8 310 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 B3GALT5Q9Y2C3 310 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 FAM234BA2RU67 622 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 SHISA9B4DS77 424 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 SUPT7LO94864 414 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 PTNP21246 168 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 ME2P23368 584 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 SHC1P29353 583 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 NTSP30990 170 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 ZNF41P51814 821 aaPredicted RBP14.88□□□□□ -0.03
USE1-208ENST00000600970 C21orf58P58505 322 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 ZNF763Q0D2J5 394 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 SLC29A2Q14542 456 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 RNPS1Q15287 305 aaKnown RBP14.88□□□□□ -0.03
USE1-208ENST00000600970 ZNF678Q5SXM1 525 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 FAM71E1Q6IPT2 247 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 GPRIN3Q6ZVF9 776 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 TRABD2AQ86V40 505 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 LILRA2Q8N149 483 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 ACTRT2Q8TDY3 377 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 KCNK17Q96T54 332 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 USB1Q9BQ65 265 aaKnown RBP14.88□□□□□ -0.03
USE1-208ENST00000600970 BEX2Q9BXY8 128 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 SRXN1Q9BYN0 137 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 POTEKPQ9BYX7 375 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 MIEF1Q9NQG6 463 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 TAS2R7Q9NYW3 318 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 KLHL13Q9P2N7 655 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 FREM1Q5H8C1 2179 aa14.88□□□□□ -0.03
USE1-208ENST00000600970 TTC36A6NLP5 189 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 NGFRP08138 427 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 INHBAP08476 426 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 PABPC4LP0CB38 370 aaKnown RBP14.87□□□□□ -0.03
USE1-208ENST00000600970 PHBP35232 272 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 SFTPDP35247 375 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 MAP3K8P41279 467 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 NUDT6P53370 316 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 IRX1P78414 480 aaPredicted RBP14.87□□□□□ -0.03
USE1-208ENST00000600970 VLDLRP98155 873 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 ITGADQ13349 1161 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 TEX35Q5T0J7 233 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 BHLHA15Q7RTS1 189 aaPredicted RBP14.87□□□□□ -0.03
USE1-208ENST00000600970 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.87□□□□□ -0.03
USE1-208ENST00000600970 GPR151Q8TDV0 419 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 REXO5Q96IC2 774 aaKnown RBP14.87□□□□□ -0.03
USE1-208ENST00000600970 TMEM237Q96Q45 408 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 C19orf24Q9BVV8 132 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 AMBRA1Q9C0C7 1298 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 HHATLQ9HCP6 504 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 EQTNQ9NQ60 294 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 FAIMQ9NVQ4 179 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 NINJ2Q9NZG7 142 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 TIMM22Q9Y584 194 aa14.87□□□□□ -0.03
USE1-208ENST00000600970 ZNF814B7Z6K7 855 aa14.86□□□□□ -0.03
USE1-208ENST00000600970 HAX1O00165 279 aa14.86□□□□□ -0.03
USE1-208ENST00000600970 NKX2-2O95096 273 aa14.86□□□□□ -0.03
USE1-208ENST00000600970 CASP9P55211 416 aa14.86□□□□□ -0.03
USE1-208ENST00000600970 CDH11P55287 796 aa14.86□□□□□ -0.03
USE1-208ENST00000600970 LOXL1Q08397 574 aaPredicted RBP14.86□□□□□ -0.03
USE1-208ENST00000600970 P2RY6Q15077 328 aa14.86□□□□□ -0.03
USE1-208ENST00000600970 GLE1Q53GS7 698 aaKnown RBP14.86□□□□□ -0.03
USE1-208ENST00000600970 CLEC2AQ6UVW9 174 aa14.86□□□□□ -0.03
USE1-208ENST00000600970 ZAR1Q86SH2 424 aa14.86□□□□□ -0.03
USE1-208ENST00000600970 TDRPQ86YL5 185 aa14.86□□□□□ -0.03
USE1-208ENST00000600970 HOXB13Q92826 284 aaPredicted RBP14.86□□□□□ -0.03
USE1-208ENST00000600970 CPNE4Q96A23 557 aaPredicted RBP14.86□□□□□ -0.03
USE1-208ENST00000600970 SH3YL1Q96HL8 342 aaPredicted RBP14.86□□□□□ -0.03
USE1-208ENST00000600970 ADAD1Q96M93 576 aaKnown RBP14.86□□□□□ -0.03
USE1-208ENST00000600970 GP6Q9HCN6 339 aa14.86□□□□□ -0.03
USE1-208ENST00000600970 LPAR3Q9UBY5 353 aa14.86□□□□□ -0.03
USE1-208ENST00000600970 ANK2Q01484 3957 aa14.86□□□□□ -0.03
USE1-208ENST00000600970 SERTM1A2A2V5 107 aa14.85□□□□□ -0.03
USE1-208ENST00000600970 ELOA3DA6NLF2 546 aaPredicted RBP14.85□□□□□ -0.03
USE1-208ENST00000600970 PRKD3O94806 890 aa14.85□□□□□ -0.03
USE1-208ENST00000600970 YES1P07947 543 aa14.85□□□□□ -0.03
USE1-208ENST00000600970 IFI6P09912 130 aa14.85□□□□□ -0.03
USE1-208ENST00000600970 LINGO3P0C6S8 592 aa14.85□□□□□ -0.03
USE1-208ENST00000600970 PRPS2P11908 318 aa14.85□□□□□ -0.03
USE1-208ENST00000600970 SERPINB9P50453 376 aa14.85□□□□□ -0.03
USE1-208ENST00000600970 MANFP55145 182 aaKnown RBP14.85□□□□□ -0.03
USE1-208ENST00000600970 DSCR9P59020 149 aa14.85□□□□□ -0.03
USE1-208ENST00000600970 SRSF2Q01130 221 aaKnown RBP14.85□□□□□ -0.03
USE1-208ENST00000600970 PPA1Q15181 289 aa14.85□□□□□ -0.03
USE1-208ENST00000600970 STK11Q15831 433 aa14.85□□□□□ -0.03
USE1-208ENST00000600970 ELOA3BQ3SY89 546 aa14.85□□□□□ -0.03
USE1-208ENST00000600970 SPDYAQ5MJ70 313 aa14.85□□□□□ -0.03
USE1-208ENST00000600970 AGAP6Q5VW22 663 aa14.85□□□□□ -0.03
USE1-208ENST00000600970 C11orf71Q6IPW1 123 aa14.85□□□□□ -0.03
USE1-208ENST00000600970 FCRLAQ7L513 359 aa14.85□□□□□ -0.03
USE1-208ENST00000600970 ZNF551Q7Z340 670 aaPredicted RBP14.85□□□□□ -0.03
USE1-208ENST00000600970 MMGT1Q8N4V1 131 aa14.85□□□□□ -0.03
USE1-208ENST00000600970 ELOA3Q8NG57 546 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms