RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 NPDC1Q9NQX5 325 aaPredicted RBP7.95□□□□□ -1.14
SSBP4-208ENST00000600628 POLE3Q9NRF9 147 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 INTS9Q9NV88 658 aaKnown RBP7.95□□□□□ -1.14
SSBP4-208ENST00000600628 JKAMPQ9P055 326 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 MED11Q9P086 117 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 PPP4R1LQ9P1A2 415 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 Q9UFV3 132 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 ICAM5Q9UMF0 924 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 SNX8Q9Y5X2 465 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 ABCA4P78363 2273 aa7.95□□□□□ -1.14
SSBP4-208ENST00000600628 A0A087WZY1 265 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 TRBV5-3A0A0A0MS03 114 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 RNF103-CHMP3A0A140T963 221 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 FAM234BA2RU67 622 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 OR2M5A3KFT3 312 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 CCDC154A6NI56 674 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 C9JVG2 144 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 C19orf84I3L1E1 186 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 UBDO15205 165 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 OIP5O43482 229 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 SCO2O43819 266 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 KIAA0513O60268 411 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 FCMRO60667 390 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 SLC22A3O75751 556 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 UGT2B17O75795 530 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 BMP2P12643 396 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 PRF1P14222 555 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 MATN1P21941 496 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 RPS4Y1P22090 263 aaKnown RBP7.94□□□□□ -1.14
SSBP4-208ENST00000600628 PCYT1AP49585 367 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 ATP4BP51164 291 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 RPS26P62854 115 aaKnown RBP7.94□□□□□ -1.14
SSBP4-208ENST00000600628 GUSBP1Q15486 140 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 PLPPR5Q32ZL2 321 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 SLC25A53Q5H9E4 307 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 LRIF1Q5T3J3 769 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 CCNJQ5T5M9 372 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 BLOC1S3Q6QNY0 202 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 ARSKQ6UWY0 536 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 FRRS1Q6ZNA5 592 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 GGNQ86UU5 652 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 IFNEQ86WN2 208 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 VPS37AQ8NEZ2 397 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 OR4A15Q8NGL6 344 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 POC1BQ8TC44 478 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 ADAMTS15Q8TE58 950 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 ZFP90Q8TF47 636 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 GTF2H4Q92759 462 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 ARSGQ96EG1 525 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 DTNBP1Q96EV8 351 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 OTUB1Q96FW1 271 aaPredicted RBP7.94□□□□□ -1.14
SSBP4-208ENST00000600628 OR52E6Q96RD3 313 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 NPAS1Q99742 590 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 SPOCK3Q9BQ16 436 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 TUBA1CQ9BQE3 449 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 INPP5KQ9BT40 448 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 PAIP1Q9H074 479 aaKnown RBP7.94□□□□□ -1.14
SSBP4-208ENST00000600628 SLC38A1Q9H2H9 487 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 OR51I1Q9H343 314 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 CCDC134Q9H6E4 229 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 SDHAF3Q9NRP4 125 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 ALKBH4Q9NXW9 302 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 FAF1Q9UNN5 650 aaPredicted RBP7.94□□□□□ -1.14
SSBP4-208ENST00000600628 ZNF337Q9Y3M9 751 aa7.94□□□□□ -1.14
SSBP4-208ENST00000600628 ZNF469Q96JG9 3925 aaPredicted RBP7.94□□□□□ -1.14
SSBP4-208ENST00000600628 MYO9AB2RTY4 2548 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 FREM1Q5H8C1 2179 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 C15orf38-AP3S2A0A0A6YYH1 394 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 CENPVL1A0A0U1RR11 272 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 FAM47E-STBD1D6RA91 191 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 ADAMDEC1O15204 470 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 CFLARO15519 480 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 NDUFB5O43674 189 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 EFNA2O43921 213 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 RCBTB2O95199 551 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 AGR2O95994 175 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 IL18BPO95998 194 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 COX6B1P14854 86 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 CD1EP15812 388 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 ZNF17P17021 662 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 CLK3P49761 638 aaKnown RBP7.93□□□□□ -1.14
SSBP4-208ENST00000600628 POLR2JP52435 117 aaKnown RBP7.93□□□□□ -1.14
SSBP4-208ENST00000600628 ZNF136P52737 540 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 SUCLG1P53597 346 aaKnown RBP7.93□□□□□ -1.14
SSBP4-208ENST00000600628 AQP5P55064 265 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 SUMO3P55854 103 aaPredicted RBP7.93□□□□□ -1.14
SSBP4-208ENST00000600628 ZNF117Q03924 483 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 SKP2Q13309 424 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 TOMM20Q15388 145 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 SF3B4Q15427 424 aaKnown RBP eCLIP7.93□□□□□ -1.141e-6■■■■■ 37.1
SSBP4-208ENST00000600628 MAPK14Q16539 360 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 CTU2Q2VPK5 515 aaKnown RBP7.93□□□□□ -1.14
SSBP4-208ENST00000600628 COX20Q5RI15 118 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 TYW3Q6IPR3 259 aaKnown RBP7.93□□□□□ -1.14
SSBP4-208ENST00000600628 CGB2Q6NT52 195 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 AAGABQ6PD74 315 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 CBLN3Q6UW01 205 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 ENPP6Q6UWR7 440 aa7.93□□□□□ -1.14
SSBP4-208ENST00000600628 CCDC71Q8IV32 467 aaPredicted RBP7.93□□□□□ -1.14
SSBP4-208ENST00000600628 MCEMP1Q8IX19 187 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms