RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 NFATC3Q12968 1075 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 DNAL1Q4LDG9 190 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 RNFT1Q5M7Z0 435 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 ZNF836Q6ZNA1 936 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 CCDC121Q6ZUS5 278 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 CCDC80Q76M96 950 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 ZFP62Q8NB50 900 aaPredicted RBP18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 PHOSPHO1Q8TCT1 267 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 DUSP19Q8WTR2 217 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 WDR60Q8WVS4 1066 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 PMM1Q92871 262 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 TAMM41Q96BW9 452 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 ZNF597Q96LX8 424 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 THTPAQ9BU02 230 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 PPP4R1LQ9P1A2 415 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 EGFL7Q9UHF1 273 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 PRPF19Q9UMS4 504 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 ZNF443Q9Y2A4 671 aaPredicted RBP18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 GLSO94925 669 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 MFN2O95140 757 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 RASAL1O95294 804 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 RFPL3SP0C7P2 107 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 PABPC4LP0CB38 370 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 NID1P14543 1247 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 PGM1P36871 562 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 MASP1P48740 699 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 EEF1A1P68104 462 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 KCNJ10P78508 379 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 DMTNQ08495 405 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 FXNQ16595 210 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 INTS11Q5TA45 600 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 TIGD3Q6B0B8 471 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 PACS2Q86VP3 889 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 COMTD1Q86VU5 262 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 OIT3Q8WWZ8 545 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 ARSGQ96EG1 525 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 CADM1Q9BY67 442 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 TTTY12Q9BZ98 90 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 ZFP64Q9NPA5 681 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 FBXL2Q9UKC9 423 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 BOKQ9UMX3 212 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 NTNG1Q9Y2I2 539 aa18.25■□□□□ 0.51
SHKBP1-222ENST00000600320 IGLV3-32A0A0A0MS00 114 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 FAM166BA8MTA8 275 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 CXCR6O00574 342 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 GMFGO60234 142 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 TPST1O60507 370 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 EPPINO95925 133 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 THBS1P07996 1170 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 IL7RP16871 459 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 GGT1P19440 569 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 ADH7P40394 386 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 PLGLB1Q02325 96 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 ZNF117Q03924 483 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 C17orf67Q0P5P2 114 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 GLIPR1L2Q4G1C9 344 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 LIN52Q52LA3 116 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 PRR30Q53SZ7 412 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 ZNF311Q5JNZ3 666 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 MRPL2Q5T653 305 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 CBLN3Q6UW01 205 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 PATL1Q86TB9 770 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 KRT73Q86Y46 540 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 PLCZ1Q86YW0 608 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 CLIP4Q8N3C7 705 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 FADS6Q8N9I5 356 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 SMYD1Q8NB12 490 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 FAM98AQ8NCA5 519 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 LSM14AQ8ND56 463 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 OR2M3Q8NG83 312 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 OR1J4Q8NGS1 313 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 FIG4Q92562 907 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 CNOT9Q92600 299 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 SH3YL1Q96HL8 342 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 GNRHR2Q96P88 292 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 PCDHAC1Q9H158 963 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 DSN1Q9H410 356 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 SDHAF3Q9NRP4 125 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 RLIMQ9NVW2 624 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 MED11Q9P086 117 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 CARD8Q9Y2G2 431 aa18.24■□□□□ 0.51
SHKBP1-222ENST00000600320 ATRXP46100 2492 aa18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 H3BNH8 94 aa18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 GSTA4O15217 222 aa18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 GSC2O15499 205 aa18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 PDE9AO76083 593 aa18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 CSTAP01040 98 aa18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 UBL4AP11441 157 aa18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 KDELR2P33947 212 aa18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 INAQ16352 499 aa18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 MISPQ8IVT2 679 aa18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 ARHGAP24Q8N264 748 aa18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 CISD2Q8N5K1 135 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 TMEM251Q8N6I4 163 aa18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 FAM71CQ8NEG0 241 aa18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 GPR32P1Q8NGA4 272 aa18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 ZNF607Q96SK3 696 aa18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 SEC14L3Q9UDX4 400 aa18.23■□□□□ 0.51
SHKBP1-222ENST00000600320 C15orf41Q9Y2V0 281 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms