RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 TRABD2AQ86V40 505 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 TUSC5Q8IXB3 177 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 KBTBD8Q8NFY9 601 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 ELOA3Q8NG57 546 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 METTL6Q8TCB7 284 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 RNF128Q8TEB7 428 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 ABHD3Q8WU67 409 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 DCAKDQ8WVC6 231 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 PIK3R3Q92569 461 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 SLC9A6Q92581 669 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 ZNF75CPQ92670 426 aaPredicted RBP5.42□□□□□ -1.54
VRK3-220ENST00000600259 GIMAP5Q96F15 307 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 EGLN2Q96KS0 407 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 RNF145Q96MT1 663 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 TNFRSF13CQ96RJ3 184 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 SRXN1Q9BYN0 137 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 PRRG4Q9BZD6 226 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 C12orf49Q9H741 205 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 LRTM1Q9HBL6 345 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 Q9N2J8 555 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 TMEM160Q9NX00 188 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 CISD1Q9NZ45 108 aaKnown RBP5.42□□□□□ -1.54
VRK3-220ENST00000600259 TMEM216Q9P0N5 145 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 MCTS1Q9ULC4 181 aaKnown RBP5.42□□□□□ -1.54
VRK3-220ENST00000600259 GRID1Q9ULK0 1009 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 B3GALT5Q9Y2C3 310 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 CCL27Q9Y4X3 112 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 TIMM22Q9Y584 194 aa5.42□□□□□ -1.54
VRK3-220ENST00000600259 TENM1Q9UKZ4 2725 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 A0A1W2PP18 115 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 ESYT3A0FGR9 886 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 E7EQL1 145 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 CLOCKO15516 846 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 OIP5O43482 229 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 NDUFB5O43674 189 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 SSX4O60224 188 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 SUPT7LO94864 414 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 KCNK2O95069 426 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 PGM3O95394 542 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 SYNGR4O95473 234 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 PLGP00747 810 aaPredicted RBP5.41□□□□□ -1.54
VRK3-220ENST00000600259 ADAP00813 363 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 TP53P04637 393 aaPredicted RBP5.41□□□□□ -1.54
VRK3-220ENST00000600259 YES1P07947 543 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 ACP2P11117 423 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 IMPDH1P20839 514 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 PTNP21246 168 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 FRKP42685 505 aaPredicted RBP5.41□□□□□ -1.54
VRK3-220ENST00000600259 GSTM5P46439 218 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 CLK3P49761 638 aaKnown RBP5.41□□□□□ -1.54
VRK3-220ENST00000600259 PRKAA2P54646 552 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 PSMD4P55036 377 aaKnown RBP5.41□□□□□ -1.54
VRK3-220ENST00000600259 FOXA1P55317 472 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 C21orf58P58505 322 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 LSM11P83369 360 aaKnown RBP eCLIP5.41□□□□□ -1.54
VRK3-220ENST00000600259 VLDLRP98155 873 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 SLC7A5Q01650 507 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 BTKQ06187 659 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 BSPH1Q075Z2 132 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 FAPQ12884 760 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 ITGADQ13349 1161 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 SLC29A2Q14542 456 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 P2RY6Q15077 328 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 CD226Q15762 336 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 UAP1Q16222 522 aaPredicted RBP5.41□□□□□ -1.54
VRK3-220ENST00000600259 ZNF239Q16600 458 aaKnown RBP5.41□□□□□ -1.54
VRK3-220ENST00000600259 SPIN4Q56A73 249 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 GTF2IRD2BQ6EKJ0 949 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 ALKBH2Q6NS38 261 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 TIFABQ6ZNK6 161 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 GPRIN3Q6ZVF9 776 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 ZNF572Q7Z3I7 529 aaPredicted RBP5.41□□□□□ -1.54
VRK3-220ENST00000600259 TRIM46Q7Z4K8 759 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 GTF2IRD2Q86UP8 949 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 STK32CQ86UX6 486 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 LILRA2Q8N149 483 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 ZNF619Q8N2I2 560 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 GATSQ8NAP1 163 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 SLC16A11Q8NCK7 471 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 GTPBP3Q969Y2 492 aaKnown RBP5.41□□□□□ -1.54
VRK3-220ENST00000600259 ZBTB8AQ96BR9 441 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 KLHL15Q96M94 604 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 TMEM237Q96Q45 408 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 KCNA7Q96RP8 456 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 USB1Q9BQ65 265 aaKnown RBP5.41□□□□□ -1.54
VRK3-220ENST00000600259 TACO1Q9BSH4 297 aaKnown RBP5.41□□□□□ -1.54
VRK3-220ENST00000600259 EBPLQ9BY08 206 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 TBL1XR1Q9BZK7 514 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 RAB17Q9H0T7 212 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 GSTO2Q9H4Y5 243 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 ESRP2Q9H6T0 727 aaKnown RBP5.41□□□□□ -1.54
VRK3-220ENST00000600259 TMEM185BQ9H7F4 350 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 CXorf36Q9H7Y0 433 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 COQ10BQ9H8M1 238 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 BCO1Q9HAY6 547 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 GP6Q9HCN6 339 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 TNFRSF12AQ9NP84 129 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 MYNNQ9NPC7 610 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 FANCFQ9NPI8 374 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 GIMAP4Q9NUV9 329 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms