RNA–Protein interactions for RNA: ENST00000599560.5

NUP62-216, Transcript of nucleoporin 62, human

TSL 2

Gene NUP62, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-216	ENST00000599560	FAM110B	Q8TC76	370 aa		10.6	□□□□□ -0.71
NUP62-216	ENST00000599560	ZNF75CP	Q92670	426 aa	Predicted RBP	10.6	□□□□□ -0.71
NUP62-216	ENST00000599560	ZNF524	Q96C55	264 aa		10.6	□□□□□ -0.71
NUP62-216	ENST00000599560	KLHL15	Q96M94	604 aa		10.6	□□□□□ -0.71
NUP62-216	ENST00000599560	SERPINI1	Q99574	410 aa		10.6	□□□□□ -0.71
NUP62-216	ENST00000599560	BAG1	Q99933	345 aa	Predicted RBP	10.6	□□□□□ -0.71
NUP62-216	ENST00000599560	VRK1	Q99986	396 aa	Predicted RBP	10.6	□□□□□ -0.71
NUP62-216	ENST00000599560	USB1	Q9BQ65	265 aa	Known RBP	10.6	□□□□□ -0.71
NUP62-216	ENST00000599560	PSD2	Q9BQI7	771 aa		10.6	□□□□□ -0.71
NUP62-216	ENST00000599560	NAT9	Q9BTE0	207 aa		10.6	□□□□□ -0.71
NUP62-216	ENST00000599560	TRMO	Q9BU70	441 aa		10.6	□□□□□ -0.71
NUP62-216	ENST00000599560	RBM4	Q9BWF3	364 aa	Known RBP	10.6	□□□□□ -0.71
NUP62-216	ENST00000599560	MED17	Q9NVC6	651 aa		10.6	□□□□□ -0.71
NUP62-216	ENST00000599560	ADAM29	Q9UKF5	820 aa		10.6	□□□□□ -0.71
NUP62-216	ENST00000599560	FKBP7	Q9Y680	259 aa		10.6	□□□□□ -0.71
NUP62-216	ENST00000599560	WNK2	Q9Y3S1	2297 aa		10.6	□□□□□ -0.71
NUP62-216	ENST00000599560	GXYLT2	A0PJZ3	443 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	DNALI1	O14645	258 aa	Predicted RBP	10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	PRKD3	O94806	890 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	AVP	P01185	164 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	IVD	P26440	423 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	GIF	P27352	417 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	PRR5	P85299	388 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	POU4F1	Q01851	419 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	C17orf67	Q0P5P2	114 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	ZNF155	Q12901	538 aa	Predicted RBP	10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	MORF4L2	Q15014	288 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	CPTP	Q5TA50	214 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	GOLGA7	Q7Z5G4	137 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	TBC1D1	Q86TI0	1168 aa	Predicted RBP	10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	LSR	Q86X29	649 aa	Predicted RBP	10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	LILRA2	Q8N149	483 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	ZDHHC22	Q8N966	263 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	NUP43	Q8NFH3	380 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	ZNF418	Q8TF45	676 aa	Predicted RBP	10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	TAF15	Q92804	592 aa	Known RBP eCLIP	10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	C1QTNF5	Q9BXJ0	243 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	BCO1	Q9HAY6	547 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	FARSB	Q9NSD9	589 aa	Known RBP	10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	UTS2R	Q9UKP6	389 aa		10.59	□□□□□ -0.71
NUP62-216	ENST00000599560	GOLGA6L10	A0A0M3HER8	536 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	C7orf72	A4D263	438 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	OR7A17	O14581	309 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	IL33	O95760	270 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	NTF4	P34130	210 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	CHN2	P52757	468 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	SLC12A2	P55011	1212 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	PHC1	P78364	1004 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	MRPS22	P82650	360 aa	Known RBP	10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	FRG1	Q14331	258 aa	Known RBP	10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	ZKSCAN8	Q15776	578 aa	Predicted RBP	10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	ERCC6L	Q2NKX8	1250 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	SGO1	Q5FBB7	561 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	P2RY8	Q86VZ1	359 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	ZCCHC24	Q8N2G6	241 aa	Known RBP	10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	WDR31	Q8NA23	367 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	TRPC4AP	Q8TEL6	797 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	HPS1	Q92902	700 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	EXOSC8	Q96B26	276 aa	Known RBP	10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	TBL1XR1	Q9BZK7	514 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	IPPK	Q9H8X2	491 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	LPAR2	Q9HBW0	351 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	MYNN	Q9NPC7	610 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	PFDN4	Q9NQP4	134 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	STOML1	Q9UBI4	398 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	SPEF1	Q9Y4P9	236 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	ZNF780B	Q9Y6R6	833 aa		10.58	□□□□□ -0.72
NUP62-216	ENST00000599560	ARHGAP32	A7KAX9	2087 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	LYNX1	G3V0Z9	82 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	PLOD3	O60568	738 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	KERA	O60938	352 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	BCAS2	O75934	225 aa	Predicted RBP	10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	LINGO3	P0C6S8	592 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	PABPC4L	P0CB38	370 aa	Known RBP	10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	LYNX1	P0DP58	116 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	PGC	P20142	388 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	SLC18A2	Q05940	514 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	FOXF1	Q12946	379 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	GTF2H2	Q13888	395 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	CYP27C1	Q4G0S4	372 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	GTF2H2C	Q6P1K8	395 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	USP43	Q70EL4	1123 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	CMC1	Q7Z7K0	106 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	ZAR1	Q86SH2	424 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	TRABD2A	Q86V40	505 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	OR4C3	Q8NH37	302 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	STAG3L4	Q8TBR4	150 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	FBF1	Q8TES7	1133 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	CPNE4	Q96A23	557 aa	Predicted RBP	10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	MRPL24	Q96A35	216 aa	Known RBP	10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	SH3YL1	Q96HL8	342 aa	Predicted RBP	10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	REXO5	Q96IC2	774 aa	Known RBP	10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	GPR22	Q99680	433 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	GP6	Q9HCN6	339 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	MOK	Q9UQ07	419 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	ACOT9	Q9Y305	439 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560	ANGPTL3	Q9Y5C1	460 aa		10.57	□□□□□ -0.72
NUP62-216	ENST00000599560		A0A087WZY1	265 aa		10.56	□□□□□ -0.72
NUP62-216	ENST00000599560		A0A1W2PNR3	127 aa		10.56	□□□□□ -0.72
NUP62-216	ENST00000599560	UGDH	O60701	494 aa		10.56	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms