RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 ZCCHC12Q6PEW1 402 aa18.89■□□□□ 0.61
PNKP-212ENST00000599454 ZYG11AQ6WRX3 759 aa18.89■□□□□ 0.61
PNKP-212ENST00000599454 TRMT10CQ7L0Y3 403 aaKnown RBP18.89■□□□□ 0.61
PNKP-212ENST00000599454 NOA1Q8NC60 698 aaKnown RBP18.89■□□□□ 0.61
PNKP-212ENST00000599454 MNS1Q8NEH6 495 aa18.89■□□□□ 0.61
PNKP-212ENST00000599454 FAM110BQ8TC76 370 aa18.89■□□□□ 0.61
PNKP-212ENST00000599454 ZBED6CLQ96FA7 236 aaPredicted RBP18.89■□□□□ 0.61
PNKP-212ENST00000599454 TRMT61AQ96FX7 289 aaKnown RBP18.89■□□□□ 0.61
PNKP-212ENST00000599454 MS4A4EQ96PG1 132 aa18.89■□□□□ 0.61
PNKP-212ENST00000599454 NGBQ9NPG2 151 aa18.89■□□□□ 0.61
PNKP-212ENST00000599454 UBQLN4Q9NRR5 601 aa18.89■□□□□ 0.61
PNKP-212ENST00000599454 LAMP3Q9UQV4 416 aa18.89■□□□□ 0.61
PNKP-212ENST00000599454 A0A0J9YW62 118 aa18.88■□□□□ 0.61
PNKP-212ENST00000599454 A0A1W2PQD3 144 aa18.88■□□□□ 0.61
PNKP-212ENST00000599454 GOLGA8RI6L899 631 aa18.88■□□□□ 0.61
PNKP-212ENST00000599454 TBX19O60806 448 aa18.88■□□□□ 0.61
PNKP-212ENST00000599454 SEC22BO75396 215 aa18.88■□□□□ 0.61
PNKP-212ENST00000599454 EIF1P41567 113 aaKnown RBP18.88■□□□□ 0.61
PNKP-212ENST00000599454 KIAA0040Q15053 153 aa18.88■□□□□ 0.61
PNKP-212ENST00000599454 RNPS1Q15287 305 aaKnown RBP18.88■□□□□ 0.61
PNKP-212ENST00000599454 FRMD7Q6ZUT3 714 aa18.88■□□□□ 0.61
PNKP-212ENST00000599454 NUP43Q8NFH3 380 aa18.88■□□□□ 0.61
PNKP-212ENST00000599454 OSTF1Q92882 214 aa18.88■□□□□ 0.61
PNKP-212ENST00000599454 REXO5Q96IC2 774 aaKnown RBP18.88■□□□□ 0.61
PNKP-212ENST00000599454 EGLN2Q96KS0 407 aa18.88■□□□□ 0.61
PNKP-212ENST00000599454 KLHL15Q96M94 604 aa18.88■□□□□ 0.61
PNKP-212ENST00000599454 USB1Q9BQ65 265 aaKnown RBP18.88■□□□□ 0.61
PNKP-212ENST00000599454 C12orf49Q9H741 205 aa18.88■□□□□ 0.61
PNKP-212ENST00000599454 GP6Q9HCN6 339 aa18.88■□□□□ 0.61
PNKP-212ENST00000599454 TIGARQ9NQ88 270 aa18.88■□□□□ 0.61
PNKP-212ENST00000599454 RNF115Q9Y4L5 304 aa18.88■□□□□ 0.61
PNKP-212ENST00000599454 CCL27Q9Y4X3 112 aa18.88■□□□□ 0.61
PNKP-212ENST00000599454 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 G3V2L1 256 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 OVOL3O00110 214 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 SCDO00767 359 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 KCNK2O95069 426 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 UROSP10746 265 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 PYGBP11216 843 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 ELK4P28324 431 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 SERPINB4P48594 390 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 PRKAG1P54619 331 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 CARD18P57730 90 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 DMTNQ08495 405 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 ZNF844Q08AG5 666 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 CLEC12BQ2HXU8 276 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 CFAP157Q5JU67 520 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 TMEM201Q5SNT2 666 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 HEPHL1Q6MZM0 1159 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 MFSD12Q6NUT3 480 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 GATSQ8NAP1 163 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 B4GALNT2Q8NHY0 566 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 RNF128Q8TEB7 428 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 FBXW5Q969U6 566 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 CPNE4Q96A23 557 aaPredicted RBP18.87■□□□□ 0.61
PNKP-212ENST00000599454 S100PBPQ96BU1 408 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 GIMAP5Q96F15 307 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 NPAS1Q99742 590 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 CCT7Q99832 543 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 ESRP2Q9H6T0 727 aaKnown RBP18.87■□□□□ 0.61
PNKP-212ENST00000599454 TMEM185BQ9H7F4 350 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 ACSS1Q9NUB1 689 aaPredicted RBP18.87■□□□□ 0.61
PNKP-212ENST00000599454 PLCE1Q9P212 2302 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 PSMC3IPQ9P2W1 217 aaPredicted RBP18.87■□□□□ 0.61
PNKP-212ENST00000599454 STAB1Q9NY15 2570 aa18.87■□□□□ 0.61
PNKP-212ENST00000599454 SLC28A1O00337 649 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 RIPK2O43353 540 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 GLRA3O75311 464 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 OPN1LWP04000 364 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 ALOX5P09917 674 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 ACP2P11117 423 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 IDUAP35475 653 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 FRKP42685 505 aaPredicted RBP18.86■□□□□ 0.61
PNKP-212ENST00000599454 MANFP55145 182 aaKnown RBP18.86■□□□□ 0.61
PNKP-212ENST00000599454 DNAJB13P59910 316 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 KRTAP1-1Q07627 177 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 VEZF1Q14119 521 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 ZNF239Q16600 458 aaKnown RBP18.86■□□□□ 0.61
PNKP-212ENST00000599454 FIGNL1Q6PIW4 674 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 LILRA2Q8N149 483 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 GABRG1Q8N1C3 465 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 SLC16A11Q8NCK7 471 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 POC1BQ8TC44 478 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 CIDECQ96AQ7 238 aaPredicted RBP18.86■□□□□ 0.61
PNKP-212ENST00000599454 PPCDCQ96CD2 204 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 SH3YL1Q96HL8 342 aaPredicted RBP18.86■□□□□ 0.61
PNKP-212ENST00000599454 REEP4Q9H6H4 257 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 LRTM1Q9HBL6 345 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 C1orf109Q9NX04 203 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 EMCNQ9ULC0 261 aa18.86■□□□□ 0.61
PNKP-212ENST00000599454 GJE1A6NN92 205 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 RGS14O43566 566 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 GCM2O75603 506 aaPredicted RBP18.85■□□□□ 0.61
PNKP-212ENST00000599454 CD3EP07766 207 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 LINGO3P0C6S8 592 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 NID1P14543 1247 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 IL32P24001 234 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 ADH6P28332 368 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 PRIM2P49643 509 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 DUSP5Q16690 384 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms