RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ZNF781Q8N8C0 355 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 LINC01560Q8TB33 94 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 STON2Q8WXE9 905 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 CDS1Q92903 461 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 WNT2BQ93097 391 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 C1GALT1C1Q96EU7 318 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 LRRC37BQ96QE4 947 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 NPAS1Q99742 590 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 TM9SF2Q99805 663 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 TMEM120AQ9BXJ8 343 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 C20orf27Q9GZN8 174 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 MYLK2Q9H1R3 596 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 LIME1Q9H400 295 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 CXorf36Q9H7Y0 433 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 ZCCHC3Q9NUD5 404 aaKnown RBP12.42□□□□□ -0.42
SCAF1-203ENST00000598359 DNAJB12Q9NXW2 375 aaKnown RBP12.42□□□□□ -0.42
SCAF1-203ENST00000598359 VDAC3Q9Y277 283 aa12.42□□□□□ -0.42
SCAF1-203ENST00000598359 NPIPA5A0A0B4J1W7 369 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 TTC36A6NLP5 189 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 NPIPA7E9PJI5 369 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 C6orf47O95873 294 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 IL18BPO95998 194 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 OPN1LWP04000 364 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 ALOX5P09917 674 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 NPIPA8P0DM63 369 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 G6PDP11413 515 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 PRR5P85299 388 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 FLYWCH1Q4VC44 716 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 EXOSC6Q5RKV6 272 aaKnown RBP12.41□□□□□ -0.42
SCAF1-203ENST00000598359 SPNS3Q6ZMD2 512 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 P4HA3Q7Z4N8 544 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 COX18Q8N8Q8 333 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 OR5AK3PQ8NH89 298 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 FAM110BQ8TC76 370 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 FIG4Q92562 907 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 SH3YL1Q96HL8 342 aaPredicted RBP12.41□□□□□ -0.42
SCAF1-203ENST00000598359 ZNF845Q96IR2 970 aaPredicted RBP12.41□□□□□ -0.42
SCAF1-203ENST00000598359 UCN2Q96RP3 112 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 SORT1Q99523 831 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 RBM24Q9BX46 236 aaKnown RBP12.41□□□□□ -0.42
SCAF1-203ENST00000598359 PTGES2Q9H7Z7 377 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 SLC24A3Q9HC58 644 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 SAR1AQ9NR31 198 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 GIN1Q9NXP7 522 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 JKAMPQ9P055 326 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 HAO1Q9UJM8 370 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 KCNE3Q9Y6H6 103 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 CAPN7Q9Y6W3 813 aa12.41□□□□□ -0.42
SCAF1-203ENST00000598359 PCNX3Q9H6A9 2034 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 IGLV3-32A0A0A0MS00 114 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 A0A1W2PNV4 684 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 SLC22A20A6NK97 555 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 HCRTR2O43614 444 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 NDUFB5O43674 189 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 HNRNPCL1O60812 293 aaKnown RBP12.4□□□□□ -0.42
SCAF1-203ENST00000598359 TNFSF13O75888 250 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 PEPDP12955 493 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 SLC1A6P48664 564 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 DIO3P55073 304 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 ABCE1P61221 599 aaKnown RBP12.4□□□□□ -0.42
SCAF1-203ENST00000598359 C17orf67Q0P5P2 114 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 TP53BP2Q13625 1128 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 GANABQ14697 944 aaKnown RBP12.4□□□□□ -0.42
SCAF1-203ENST00000598359 BCL2A1Q16548 175 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 PGS1Q32NB8 556 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 SPDYE7PQ495Y7 208 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 VWA1Q6PCB0 445 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 ASRGL1Q7L266 308 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 CHMP1BQ7LBR1 199 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 RIMKLAQ8IXN7 391 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 C10orf67Q8IYJ2 551 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 CLEC4FQ8N1N0 589 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 MEIOBQ8N635 442 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 PIWIL2Q8TC59 973 aaKnown RBP12.4□□□□□ -0.42
SCAF1-203ENST00000598359 OR5P2Q8WZ92 322 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 DTNBP1Q96EV8 351 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 LRRC46Q96FV0 321 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 THOC1Q96FV9 657 aaKnown RBP12.4□□□□□ -0.42
SCAF1-203ENST00000598359 SFXN3Q9BWM7 321 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 PINK1Q9BXM7 581 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 POLDIP3Q9BY77 421 aaKnown RBP12.4□□□□□ -0.42
SCAF1-203ENST00000598359 CLEC4MQ9H2X3 399 aaPredicted RBP12.4□□□□□ -0.42
SCAF1-203ENST00000598359 GALNT8Q9NY28 637 aa12.4□□□□□ -0.42
SCAF1-203ENST00000598359 A0A0G2JND7 137 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 TUBAL3A6NHL2 446 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 A6NNC1 897 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 ALG1L2C9J202 215 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 CFLARO15519 480 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 OIP5O43482 229 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 SNUPNO95149 360 aaKnown RBP12.39□□□□□ -0.43
SCAF1-203ENST00000598359 TBXA2RP21731 343 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 DNAJA1P31689 397 aaKnown RBP12.39□□□□□ -0.43
SCAF1-203ENST00000598359 SOAT1P35610 550 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 CPOXP36551 454 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 RPL3P39023 403 aaKnown RBP12.39□□□□□ -0.43
SCAF1-203ENST00000598359 CPA2P48052 419 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 CCT3P49368 545 aaKnown RBP12.39□□□□□ -0.43
SCAF1-203ENST00000598359 PRIM2P49643 509 aa12.39□□□□□ -0.43
SCAF1-203ENST00000598359 RPS26P62854 115 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms