RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 TAS2R16Q9NYV7 291 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 LY6G6EA0A0G2JKS1 128 aa15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 ARHGAP33O14559 1287 aa15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 PRKNO60260 465 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 LYPD3O95274 346 aa15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 SYPP08247 313 aa15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 ZNF182P17025 639 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 IFNGR2P38484 337 aa15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 GPR4P46093 362 aa15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 OR1Q1Q15612 314 aa15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 GUSBP11Q6P575 273 aa15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 MBOAT2Q6ZWT7 520 aa15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 RRM2BQ7LG56 351 aa15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 STX19Q8N4C7 294 aa15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 ZNF614Q8N883 585 aa15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 PMM1Q92871 262 aa15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 TSLPQ969D9 159 aa15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 ATXN7L1Q9ULK2 861 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 U3KQA8 63 aa15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 RALGAPA1Q6GYQ0 2036 aa15.76■□□□□ 0.11
SHKBP1-216ENST00000598201 A0A1B0GTQ1 180 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 TRAPPC13A5PLN9 417 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 C17orf105B2RV13 164 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 KLF4O43474 513 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 ADAM11O75078 769 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 SLC15A1P46059 708 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 SERTAD2Q14140 314 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 SPCS2Q15005 226 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 TBCEQ15813 527 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 TMEM201Q5SNT2 666 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 ZNF574Q6ZN55 896 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 CACTIN-AS1Q8N1I8 211 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 ZNF321PQ8N8H1 164 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 POGLUT1Q8NBL1 392 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 OR8J1Q8NGP2 316 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 SAP25Q8TEE9 199 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 PTPMT1Q8WUK0 201 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 TRUB1Q8WWH5 349 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 ITPAQ9BY32 194 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 LRP3O75074 770 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 DRD5P21918 477 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 ST13P50502 369 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 IRF3Q14653 427 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 SF3A2Q15428 464 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 HLA-BQ31612 363 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 PERM1Q5SV97 790 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 GPR135Q8IZ08 494 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 ZSCAN1Q8NBB4 408 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 FGF11Q92914 225 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 ZNF501Q96CX3 271 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 MVB12AQ96EY5 273 aa15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 PNO1Q9NRX1 252 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-216ENST00000598201 OTOGLQ3ZCN5 2332 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 CPED1A4D0V7 1026 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 A8MUA0 341 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 M0R082 166 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 TLX2O43763 284 aaPredicted RBP15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 FOXD2O60548 495 aaPredicted RBP15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 SOX30O94993 753 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 GABARAPO95166 117 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 PTHP01270 115 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 FPR3P25089 353 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 TGFBR2P37173 567 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 PCYT1AP49585 367 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 EFNB1P98172 346 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 CSRP2Q16527 193 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 MINDY4Q4G0A6 757 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 MFSD4BQ5TF39 518 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 C1orf189Q5VU69 101 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 RASSF6Q6ZTQ3 369 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 ASCL5Q7RTU5 278 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 SENP5Q96HI0 755 aaPredicted RBP15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 ZNF578Q96N58 590 aaPredicted RBP15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 LMF1Q96S06 567 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 NDC1Q9BTX1 674 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 GTPBP2Q9BX10 602 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 POLDIP3Q9BY77 421 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 ZNF768Q9H5H4 540 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 GAREM1Q9H706 876 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 Q9N2J8 555 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 FGF21Q9NSA1 209 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 CNOT2Q9NZN8 540 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 IGKV3D-11A0A0A0MRZ8 115 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 LNP1A1A4G5 178 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 EFCAB10A6NFE3 127 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 NPIPB9F8W1W9 429 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 AGRPO00253 132 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 CDC42EP2O14613 210 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 SIGLEC6O43699 453 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 GUSBP08236 651 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 ADORA3P0DMS8 318 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 GALNSP34059 522 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 LIPAP38571 399 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 DSG2Q14126 1118 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 VWA2Q5GFL6 755 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 CLEC12AQ5QGZ9 265 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 KMT5CQ86Y97 462 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 BCORP1Q8N888 145 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 TOR1AIP2Q8NFQ8 470 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms