RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 CIDECQ96AQ7 238 aaPredicted RBP11.77□□□□□ -0.53
SCAF1-202ENST00000595242 MS4A6EQ96DS6 147 aa11.77□□□□□ -0.53
SCAF1-202ENST00000595242 THAP11Q96EK4 314 aa11.77□□□□□ -0.53
SCAF1-202ENST00000595242 OR2A5Q96R48 311 aa11.77□□□□□ -0.53
SCAF1-202ENST00000595242 SLC35A5Q9BS91 424 aa11.77□□□□□ -0.53
SCAF1-202ENST00000595242 PRM3Q9NNZ6 103 aa11.77□□□□□ -0.53
SCAF1-202ENST00000595242 ACSS1Q9NUB1 689 aaPredicted RBP11.77□□□□□ -0.53
SCAF1-202ENST00000595242 GPATCH2Q9NW75 528 aa11.77□□□□□ -0.53
SCAF1-202ENST00000595242 DSCAMO60469 2012 aa11.77□□□□□ -0.53
SCAF1-202ENST00000595242 H0YIG0 161 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 EI24O14681 340 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 PDPK1O15530 556 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 TNFAIP8O95379 198 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 KRT75O95678 551 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 FAM58BPP0C7Q3 252 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 EFNA1P20827 205 aaPredicted RBP11.76□□□□□ -0.53
SCAF1-202ENST00000595242 TRHRP34981 398 aaPredicted RBP11.76□□□□□ -0.53
SCAF1-202ENST00000595242 SSR2P43308 183 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 MAGEA8P43361 318 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 MLF1P58340 268 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 SLC26A5P58743 744 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 GPR85P60893 370 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 SNRPNP63162 240 aaKnown RBP11.76□□□□□ -0.53
SCAF1-202ENST00000595242 MYBPC1Q00872 1141 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 DAG1Q14118 895 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 NSDHLQ15738 373 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 SLC36A3Q495N2 470 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 SAXO2Q658L1 398 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 ZNF793Q6ZN11 406 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 PIWIL3Q7Z3Z3 882 aaKnown RBP11.76□□□□□ -0.53
SCAF1-202ENST00000595242 CXorf67Q86X51 503 aaPredicted RBP11.76□□□□□ -0.53
SCAF1-202ENST00000595242 PLD3Q8IV08 490 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 P3H2Q8IVL5 708 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 C11orf65Q8NCR3 313 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 TMBIM1Q969X1 311 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 ADI1Q9BV57 179 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 GABARAPL1Q9H0R8 117 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 PRDM7Q9NQW5 492 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 SMPD3Q9NY59 655 aaPredicted RBP11.76□□□□□ -0.53
SCAF1-202ENST00000595242 V9GYQ6 96 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 NCKAP5O14513 1909 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 KIAA1549Q9HCM3 1950 aa11.76□□□□□ -0.53
SCAF1-202ENST00000595242 NUP214P35658 2090 aaPredicted RBP11.75□□□□□ -0.53
SCAF1-202ENST00000595242 RNF103-CHMP3A0A140T963 221 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 C4orf51C9J302 202 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 H0YAE9 185 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 PDLIM1O00151 329 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 BCKDKO14874 412 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 P2RX6O15547 441 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 GUCY1B2O75343 617 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 CST1P01037 141 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 MT-ND1P03886 318 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 SMIM18P0DKX4 95 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 ARAFP10398 606 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 ZNF23P17027 643 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 HIST1H1TP22492 207 aaPredicted RBP11.75□□□□□ -0.53
SCAF1-202ENST00000595242 MYF6P23409 242 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 ALDH3A2P51648 485 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 STXBP1P61764 594 aaKnown RBP11.75□□□□□ -0.53
SCAF1-202ENST00000595242 MERTKQ12866 999 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 NDUFA9Q16795 377 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 TOR1AIP1Q5JTV8 583 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.75□□□□□ -0.53
SCAF1-202ENST00000595242 GCNT6Q5T4J0 391 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 TRIM40Q6P9F5 258 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 USP51Q70EK9 711 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 VN1R4Q7Z5H5 301 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 ST13P4Q8IZP2 240 aaPredicted RBP11.75□□□□□ -0.53
SCAF1-202ENST00000595242 OR5K1Q8NHB7 308 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 ZFP28Q8NHY6 868 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 GAL3ST3Q96A11 431 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 TM4SF19Q96DZ7 209 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 NEURL3Q96EH8 262 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 CNBD2Q96M20 576 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 Q96MF0 132 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 KCNC2Q96PR1 638 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 FAIM2Q9BWQ8 316 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 OSBPL10Q9BXB5 764 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 CXorf36Q9H7Y0 433 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 IL1RAPQ9NPH3 570 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 PRDM9Q9NQV7 894 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 SIRT3Q9NTG7 399 aaPredicted RBP11.75□□□□□ -0.53
SCAF1-202ENST00000595242 LYARQ9NX58 379 aaKnown RBP11.75□□□□□ -0.53
SCAF1-202ENST00000595242 TEX10Q9NXF1 929 aaPredicted RBP11.75□□□□□ -0.53
SCAF1-202ENST00000595242 HCN3Q9P1Z3 774 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 B4GALT7Q9UBV7 327 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 ASB4Q9Y574 426 aa11.75□□□□□ -0.53
SCAF1-202ENST00000595242 DPPA5A6NC42 116 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 OR14I1A6ND48 311 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 CRLF1O75462 422 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 GCM2O75603 506 aaPredicted RBP11.74□□□□□ -0.53
SCAF1-202ENST00000595242 NSA2O95478 260 aaKnown RBP11.74□□□□□ -0.53
SCAF1-202ENST00000595242 ALPLP05186 524 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 NUDT7P0C024 238 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 EPXP11678 715 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 ATP5A1P25705 553 aaKnown RBP11.74□□□□□ -0.53
SCAF1-202ENST00000595242 CRYBA2P53672 197 aa11.74□□□□□ -0.53
SCAF1-202ENST00000595242 PCBP3P57721 371 aaKnown RBP11.74□□□□□ -0.53
SCAF1-202ENST00000595242 ADARB1P78563 741 aaKnown RBP11.74□□□□□ -0.53
SCAF1-202ENST00000595242 TGM3Q08188 693 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms