RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 TUBA3CQ13748 450 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 GANABQ14697 944 aaKnown RBP12.21□□□□□ -0.45
VRK3-205ENST00000593919 MAD2L1BPQ15013 274 aaPredicted RBP12.21□□□□□ -0.45
VRK3-205ENST00000593919 SMN1Q16637 294 aaKnown RBP12.21□□□□□ -0.45
VRK3-205ENST00000593919 FGD3Q5JSP0 725 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 GTF2IRD2BQ6EKJ0 949 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 TMEM205Q6UW68 189 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 Q6ZPB1 254 aaPredicted RBP12.21□□□□□ -0.45
VRK3-205ENST00000593919 GTF2IRD2Q86UP8 949 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 C9orf40Q8IXQ3 194 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 PEX5LQ8IYB4 626 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 SLC5A8Q8N695 610 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 MORN4Q8NDC4 146 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 OR4D11Q8NGI4 311 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 OR4C15Q8NGM1 316 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 OR52P1PQ8NH57 321 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 WDR36Q8NI36 951 aaKnown RBP12.21□□□□□ -0.45
VRK3-205ENST00000593919 UBE2FQ969M7 185 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 MUL1Q969V5 352 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 C8orf44Q96CB5 159 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 RHNO1Q9BSD3 238 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 RLIMQ9NVW2 624 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 FOXJ2Q9P0K8 574 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 CBLCQ9ULV8 474 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 CFL2Q9Y281 166 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 GPR55Q9Y2T6 319 aaPredicted RBP12.21□□□□□ -0.45
VRK3-205ENST00000593919 OR10H1Q9Y4A9 318 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 CHST2Q9Y4C5 530 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 HSPE1-MOB4S4R3N1 261 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 HEATR5AQ86XA9 2040 aa12.21□□□□□ -0.45
VRK3-205ENST00000593919 AGAP5A6NIR3 686 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 SAGE2PA6NJ88 616 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 TTC36A6NLP5 189 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 PEX12O00623 359 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 MAN1A2O60476 641 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 KLF7O75840 302 aaPredicted RBP12.21□□□□□ -0.46
VRK3-205ENST00000593919 DNAJB5O75953 348 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 LGI1O95970 557 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 IGKV1D-16P01601 117 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 CYC1P08574 325 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 PCMT1P22061 227 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 RPS4Y1P22090 263 aaKnown RBP12.21□□□□□ -0.46
VRK3-205ENST00000593919 GPR143P51810 404 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 EBPQ15125 230 aaKnown RBP12.21□□□□□ -0.46
VRK3-205ENST00000593919 LACC1Q8IV20 430 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 CCDC71Q8IV32 467 aaPredicted RBP12.21□□□□□ -0.46
VRK3-205ENST00000593919 VANGL1Q8TAA9 524 aaPredicted RBP12.21□□□□□ -0.46
VRK3-205ENST00000593919 ADIPOR1Q96A54 375 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 GAL3ST4Q96RP7 486 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 LMF1Q96S06 567 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 PITX2Q99697 317 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 WDR77Q9BQA1 342 aaPredicted RBP12.21□□□□□ -0.46
VRK3-205ENST00000593919 GABARAPL3Q9BY60 117 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 NXF5Q9H1B4 397 aaKnown RBP12.21□□□□□ -0.46
VRK3-205ENST00000593919 OCEL1Q9H607 264 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 SCN3BQ9NY72 215 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 KCNE5Q9UJ90 142 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 ZNF443Q9Y2A4 671 aaPredicted RBP12.21□□□□□ -0.46
VRK3-205ENST00000593919 TPRKBQ9Y3C4 175 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 PTRH2Q9Y3E5 179 aaKnown RBP12.21□□□□□ -0.46
VRK3-205ENST00000593919 FAM32AQ9Y421 112 aaKnown RBP12.21□□□□□ -0.46
VRK3-205ENST00000593919 PCDHGA3Q9Y5H0 932 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 EXPH5Q8NEV8 1989 aa12.21□□□□□ -0.46
VRK3-205ENST00000593919 CLDN24A6NM45 220 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 M0R3H8 397 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 INMTO95050 263 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 UMODP07911 640 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 PRKAR1BP31321 381 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 KRT20P35900 424 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 PPICP45877 212 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 TMBIM6P55061 237 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 NPTX1Q15818 432 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 MAPK14Q16539 360 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 FLYWCH1Q4VC44 716 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 PAPD4Q6PIY7 484 aaKnown RBP12.2□□□□□ -0.46
VRK3-205ENST00000593919 C6orf15Q6UXA7 325 aaPredicted RBP12.2□□□□□ -0.46
VRK3-205ENST00000593919 TIPARPQ7Z3E1 657 aaKnown RBP12.2□□□□□ -0.46
VRK3-205ENST00000593919 CPEB2Q7Z5Q1 589 aaKnown RBP12.2□□□□□ -0.46
VRK3-205ENST00000593919 TSPYL5Q86VY4 417 aaPredicted RBP12.2□□□□□ -0.46
VRK3-205ENST00000593919 RBM45Q8IUH3 476 aaKnown RBP12.2□□□□□ -0.46
VRK3-205ENST00000593919 BCORP1Q8N888 145 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 APCDD1LQ8NCL9 501 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 ZNF540Q8NDQ6 660 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 OR9Q2Q8NGE9 314 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 PIP5K1AQ99755 562 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 SPRY4Q9C004 299 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 POLE3Q9NRF9 147 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 RHCGQ9UBD6 479 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 PADI1Q9ULC6 663 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 SLC9A8Q9Y2E8 581 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 IFT52Q9Y366 437 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 ENPP4Q9Y6X5 453 aa12.2□□□□□ -0.46
VRK3-205ENST00000593919 C2orf92A0A1B0GVN3 265 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 SYT5O00445 386 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 SEMA7AO75326 666 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 UGT2B17O75795 530 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 GADD45GO95257 159 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 CCNA2P20248 432 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 FUT4P22083 530 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 MAP2K4P45985 399 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms