RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 SMCO1Q147U7 214 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 SYPL1Q16563 259 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 C21orf62-AS1Q17RA5 79 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 EXOC3L2Q2M3D2 409 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 XKR7Q5GH72 579 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 FGD2Q7Z6J4 655 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 FAM86B1Q8N7N1 296 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 C1GALT1C1Q96EU7 318 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 LURAP1Q96LR2 239 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 ADAD1Q96M93 576 aaKnown RBP9.17□□□□□ -0.94
LIG3-216ENST00000593099 PKP2Q99959 881 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 CXorf36Q9H7Y0 433 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 CD320Q9NPF0 282 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.17□□□□□ -0.94
LIG3-216ENST00000593099 ANKRD12Q6UB98 2062 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 M0R3H8 397 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 FGF17O60258 216 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 JRKO75564 520 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 MED26O95402 600 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 F8A1P23610 371 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 HSD11B1P28845 292 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 TRHRP34981 398 aaPredicted RBP9.17□□□□□ -0.94
LIG3-216ENST00000593099 NUBP1P53384 320 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 SSTP61278 116 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 ILKQ13418 452 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 LAPTM4AQ15012 233 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 GFOD2Q3B7J2 385 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 OR5M10Q6IEU7 315 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 TMEM64Q6YI46 380 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 SIRT6Q8N6T7 355 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 LINC01555Q8NAE3 123 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 MORN4Q8NDC4 146 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 TSLPQ969D9 159 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 C8orf44Q96CB5 159 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 LMF2Q9BU23 707 aaKnown RBP9.17□□□□□ -0.94
LIG3-216ENST00000593099 UCK1Q9HA47 277 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 MCUBQ9NWR8 336 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 ZNF264O43296 627 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 CYB5AP00167 134 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 PRKACGP22612 351 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 PTPN6P29350 595 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 TLE3Q04726 772 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 C17orf67Q0P5P2 114 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 COX10Q12887 443 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 TAB1Q15750 504 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 MEP1AQ16819 746 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 EIF2S3LQ2VIR3 472 aaKnown RBP9.17□□□□□ -0.94
LIG3-216ENST00000593099 ZNF750Q32MQ0 723 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 WDR74Q6RFH5 385 aaPredicted RBP9.17□□□□□ -0.94
LIG3-216ENST00000593099 CCDC71Q8IV32 467 aaPredicted RBP9.17□□□□□ -0.94
LIG3-216ENST00000593099 ALDH16A1Q8IZ83 802 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 OR2T33Q8NG76 320 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 HMGCLL1Q8TB92 370 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 NETO1Q8TDF5 533 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 PCDHGA7Q9Y5G6 932 aa9.17□□□□□ -0.94
LIG3-216ENST00000593099 TLX2O43763 284 aaPredicted RBP9.16□□□□□ -0.94
LIG3-216ENST00000593099 F10P00742 488 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 GNALP38405 381 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 RGS19P49795 217 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 ALDH3A2P51648 485 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 MRPL49Q13405 166 aaKnown RBP9.16□□□□□ -0.94
LIG3-216ENST00000593099 IHHQ14623 411 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 ZMYND11Q15326 602 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 PRAMEF8Q5VWM4 474 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 PRAMEF7Q5VXH5 474 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 MFSD12Q6NUT3 480 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 SLC27A4Q6P1M0 643 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 FBXO42Q6P3S6 717 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 DTWD1Q8N5C7 304 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 OR4K5Q8NGD3 323 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 OR1L3Q8NH93 324 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 DUSP19Q8WTR2 217 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 ORAI3Q9BRQ5 295 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 FAM53CQ9NYF3 392 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 TNFRSF10DQ9UBN6 386 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 GXYLT2A0PJZ3 443 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 S100A2P29034 98 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 STT3AP46977 705 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 CDH11P55287 796 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 CHRNEQ04844 493 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 ATP6AP1Q15904 470 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 SGCAQ16586 387 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 AGAP7PQ5VUJ5 663 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 ZNF425Q6IV72 752 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 MED25Q71SY5 747 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 UEVLDQ8IX04 471 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 KBTBD8Q8NFY9 601 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 SLC2A12Q8TD20 617 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 NEURL3Q96EH8 262 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 AGAP4Q96P64 663 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 ITPAQ9BY32 194 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 NUAK2Q9H093 628 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 SEC16AO15027 2179 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 LCTP09848 1927 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 A0A1W2PPL8 197 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 ZNF891A8MT65 544 aaPredicted RBP9.16□□□□□ -0.94
LIG3-216ENST00000593099 PRR33A8MZF0 331 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 ZNF670-ZNF695F2Z2N8 137 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 FRS3O43559 492 aa9.16□□□□□ -0.94
LIG3-216ENST00000593099 GKN3PP0CG01 181 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms