RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 EFCAB1Q9HAE3 211 aa13.59□□□□□ -0.23
DDX39A-221ENST00000593026 SUCOQ9UBS9 1254 aaKnown RBP13.59□□□□□ -0.23
DDX39A-221ENST00000593026 SVILO95425 2214 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 A0A0G2JPF8 293 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 SERINC4A6NH21 518 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 AGAP5A6NIR3 686 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 HNRNPCL2B2RXH8 293 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 B4DXG7 233 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 HNRNPCL3B7ZW38 293 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 GTPBP1O00178 669 aaKnown RBP13.58□□□□□ -0.24
DDX39A-221ENST00000593026 HCRTR2O43614 444 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 GMFGO60234 142 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 SUSD5O60279 629 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 HCN1O60741 890 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 HNRNPCL1O60812 293 aaKnown RBP13.58□□□□□ -0.24
DDX39A-221ENST00000593026 CSTAP01040 98 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 HNRNPCL4P0DMR1 293 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 ARAFP10398 606 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 UBL4AP11441 157 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 ABOP16442 354 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 ENDOUP21128 410 aaKnown RBP13.58□□□□□ -0.24
DDX39A-221ENST00000593026 DPP4P27487 766 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 MSX1P28360 303 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 SRD5A2P31213 254 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 NUDT2P50583 147 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 DSCR4P56555 118 aaPredicted RBP13.58□□□□□ -0.24
DDX39A-221ENST00000593026 KCNC4Q03721 635 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 ZNF117Q03924 483 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 ART3Q13508 389 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 GANABQ14697 944 aaKnown RBP13.58□□□□□ -0.24
DDX39A-221ENST00000593026 MAPK14Q16539 360 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 EIPR1Q53HC9 387 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 RABL3Q5HYI8 236 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 RPS26P11Q5JNZ5 115 aaPredicted RBP13.58□□□□□ -0.24
DDX39A-221ENST00000593026 WIPI1Q5MNZ9 446 aaPredicted RBP13.58□□□□□ -0.24
DDX39A-221ENST00000593026 PRAMEF8Q5VWM4 474 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 PRAMEF7Q5VXH5 474 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 FAM91A1Q658Y4 838 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 TRILQ7L0X0 811 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 SPPL2CQ8IUH8 684 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 METTL25Q8N6Q8 603 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 FAM83FQ8NEG4 500 aaPredicted RBP13.58□□□□□ -0.24
DDX39A-221ENST00000593026 OR14L1PQ8NHC6 308 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 B4GALNT2Q8NHY0 566 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 NFKBIDQ8NI38 313 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 NEIL3Q8TAT5 605 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 ZG16BQ96DA0 208 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 TREX2Q9BQ50 279 aaPredicted RBP13.58□□□□□ -0.24
DDX39A-221ENST00000593026 OR2B2Q9GZK3 357 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 TMEM38AQ9H6F2 299 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 KAT8Q9H7Z6 458 aaKnown RBP13.58□□□□□ -0.24
DDX39A-221ENST00000593026 CACYBPQ9HB71 228 aaKnown RBP13.58□□□□□ -0.24
DDX39A-221ENST00000593026 TAS2R10Q9NYW0 307 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 L3MBTL1Q9Y468 752 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 DSPPQ9NZW4 1301 aa13.58□□□□□ -0.24
DDX39A-221ENST00000593026 HELZ2Q9BYK8 2649 aaKnown RBP13.58□□□□□ -0.24
DDX39A-221ENST00000593026 C15orf38-AP3S2A0A0A6YYH1 394 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 A0A1B0GVC2 190 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 AQP7O14520 342 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 ZNF264O43296 627 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 SLC19A2O60779 497 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 DBIP07108 87 aaKnown RBP13.57□□□□□ -0.24
DDX39A-221ENST00000593026 IL7RP16871 459 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 RPS4Y1P22090 263 aaKnown RBP13.57□□□□□ -0.24
DDX39A-221ENST00000593026 SLC6A2P23975 617 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 PTGS2P35354 604 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 GCKP35557 465 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 ADH7P40394 386 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 CDK6Q00534 326 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 SCARB2Q14108 478 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 FGFBP1Q14512 234 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 REEP3Q6NUK4 255 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 EIF3MQ7L2H7 374 aaKnown RBP13.57□□□□□ -0.24
DDX39A-221ENST00000593026 ARPINQ7Z6K5 226 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 SERPINA11Q86U17 422 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 YRDCQ86U90 279 aaKnown RBP13.57□□□□□ -0.24
DDX39A-221ENST00000593026 CHERPQ8IWX8 916 aaKnown RBP13.57□□□□□ -0.24
DDX39A-221ENST00000593026 PEX5LQ8IYB4 626 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 TMCO5AQ8N6Q1 288 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 C11orf65Q8NCR3 313 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 OR10A6Q8NH74 314 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 BBS10Q8TAM1 723 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 C1GALT1C1Q96EU7 318 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 ECSITQ9BQ95 431 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 BCL2L10Q9HD36 194 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.57□□□□□ -0.24
DDX39A-221ENST00000593026 OSGIN2Q9Y236 505 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 SLC35A3Q9Y2D2 325 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 CARD8Q9Y2G2 431 aa13.57□□□□□ -0.24
DDX39A-221ENST00000593026 MRPS18CQ9Y3D5 142 aaKnown RBP13.57□□□□□ -0.24
DDX39A-221ENST00000593026 NBASA2RRP1 2371 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 OR14I1A6ND48 311 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 ZNHIT1O43257 154 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 OIP5O43482 229 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 EIF4E2O60573 245 aaKnown RBP13.56□□□□□ -0.24
DDX39A-221ENST00000593026 CYP7B1O75881 506 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 PGM3O95394 542 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 HK1P19367 917 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 TCEA1P23193 301 aaKnown RBP13.56□□□□□ -0.24
DDX39A-221ENST00000593026 P2RX1P51575 399 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms