RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 CCR9P51686 369 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 AKR1D1P51857 326 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 PER3P56645 1201 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 PCBP3P57721 371 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 PRPS1P60891 318 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 RAB2AP61019 212 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 NKX3-2P78367 333 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 REEP5Q00765 189 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SSBP1Q04837 148 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 FPGSQ05932 587 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 PUDPQ08623 228 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 HYAL2Q12891 473 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SLAMF1Q13291 335 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 GPR176Q14439 515 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 OPCMLQ14982 345 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SWI5Q1ZZU3 235 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 CYP27C1Q4G0S4 372 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ACSM3Q53FZ2 586 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ZNF628Q5EBL2 1059 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 PRSS36Q5K4E3 855 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 NKAPLQ5M9Q1 402 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ZNF362Q5T0B9 420 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 SLC30A6Q6NXT4 461 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 LPCAT3Q6P1A2 487 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ZNF322Q6U7Q0 402 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 ARSKQ6UWY0 536 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 C17orf99Q6UX52 265 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ZNF551Q7Z340 670 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 GPR155Q7Z3F1 870 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SLC51BQ86UW2 128 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 TMEM151BQ8IW70 566 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 CDRT4Q8N9R6 151 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 FAM181AQ8N9Y4 354 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 OR2T27Q8NH04 317 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SCARB1Q8WTV0 552 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 LCN9Q8WX39 176 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 THAP4Q8WY91 577 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 UCN3Q969E3 161 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 UBE2FQ969M7 185 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SGTBQ96EQ0 304 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 DTD2Q96FN9 168 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 NEDD4LQ96PU5 975 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 FYTTD1Q96QD9 318 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 F2RL3Q96RI0 385 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 CCNL2Q96S94 520 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 DPH7Q9BTV6 452 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 TAPBPLQ9BX59 468 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SGPP1Q9BX95 441 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 MS4A8Q9BY19 250 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SLCO5A1Q9H2Y9 848 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 RHBGQ9H310 441 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 IGFLR1Q9H665 355 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 TRPV4Q9HBA0 871 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 CXXC1Q9P0U4 656 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 GNG8Q9UK08 70 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 TBC1D24Q9ULP9 559 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 PLEKHA6Q9Y2H5 1048 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 V9GYH0 126 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 PLXNB2O15031 1838 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ZFHX3Q15911 3703 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 TRAV1-2A0A0B4J238 106 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 A0A1B0GUH1 482 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 BLACEA4D250 179 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 HSPB2A8KAH6 182 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 H3BNC9 293 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 M0R3H8 397 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 P2RX6O15547 441 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 SMAD6O43541 496 aaKnown RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 PRAMEF2O60811 474 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 KDM4BO94953 1096 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 NDUFB2O95178 105 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 PAK4O96013 591 aaPredicted RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 HLA-DQA2P01906 255 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 CTRB1P17538 263 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 NFYAP23511 347 aaPredicted RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 GIFP27352 417 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 CD70P32970 193 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 IRS1P35568 1242 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 GJA5P36382 358 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 OPRD1P41143 372 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ETV5P41161 510 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 MAP3K8P41279 467 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 KIR2DL3P43628 341 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 DNASE1L1P49184 302 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ZXDBP98169 803 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 DEFA5Q01523 94 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 LRRC32Q14392 662 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ELAVL3Q14576 367 aaKnown RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 FCN2Q15485 313 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 HSPB2Q16082 182 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 RNASE12Q5GAN4 147 aaKnown RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 RPS26P11Q5JNZ5 115 aaPredicted RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 SLC35D3Q5M8T2 416 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 COX20Q5RI15 118 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 CLVS2Q5SYC1 327 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 PRAMEF17Q5VTA0 474 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ANKRD34AQ69YU3 496 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 CTRB2Q6GPI1 263 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 PLBD1Q6P4A8 553 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 TEX261Q6UWH6 196 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms