RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 VCANP13611 3396 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 CPEP16870 476 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 MAKP20794 623 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 SSTR4P31391 388 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 RFX3P48380 749 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 WNT4P56705 351 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 RACK1P63244 317 aaKnown RBP18.25■□□□□ 0.51
MBD3-209ENST00000592012 IGLV3-21P80748 117 aaPredicted RBP18.25■□□□□ 0.51
MBD3-209ENST00000592012 UBXN2BQ14CS0 331 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 OR2G6Q5TZ20 316 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 ZNF595Q8IYB9 648 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 SNRNP27Q8WVK2 155 aaKnown RBP18.25■□□□□ 0.51
MBD3-209ENST00000592012 RFKQ969G6 155 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 ASPNQ9BXN1 380 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 UBQLN3Q9H347 655 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 CHCHD3Q9NX63 227 aaKnown RBP18.25■□□□□ 0.51
MBD3-209ENST00000592012 HYKKA2RU49 373 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 OR2W5A6NFC9 320 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 NSA2O95478 260 aaKnown RBP18.25■□□□□ 0.51
MBD3-209ENST00000592012 SLC2A10O95528 541 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 IGKV1D-16P01601 117 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 S100A5P33763 92 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 RPS19P39019 145 aaKnown RBP18.25■□□□□ 0.51
MBD3-209ENST00000592012 CDH11P55287 796 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 FXYD6P3P58550 94 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 BTG2P78543 158 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 CCDC85BQ15834 202 aaPredicted RBP18.25■□□□□ 0.51
MBD3-209ENST00000592012 PDZK1Q5T2W1 519 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 BRIX1Q8TDN6 353 aaKnown RBP18.25■□□□□ 0.51
MBD3-209ENST00000592012 CNOT9Q92600 299 aaKnown RBP18.25■□□□□ 0.51
MBD3-209ENST00000592012 ARSGQ96EG1 525 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 VSTM2LQ96N03 204 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 ATP13A2Q9NQ11 1180 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 MRPS33Q9Y291 106 aaKnown RBP18.25■□□□□ 0.51
MBD3-209ENST00000592012 SPAG17Q6Q759 2223 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 UNC119BA6NIH7 251 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 HMGN1P05114 100 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 LIMS3P0CW19 117 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 LIMS4P0CW20 117 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 FUT1P19526 365 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 RANBP1P43487 201 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 GCGRP47871 477 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 BNC1Q01954 994 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 PRKCDQ05655 676 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 ZNHIT3Q15649 155 aaPredicted RBP18.24■□□□□ 0.51
MBD3-209ENST00000592012 SMAD2Q15796 467 aaKnown RBP18.24■□□□□ 0.51
MBD3-209ENST00000592012 HSDL2Q6YN16 418 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 SHFQ7M4L6 423 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 CADM4Q8NFZ8 388 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 OR9Q1Q8NGQ5 310 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 TM9SF4Q92544 642 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 OR52D1Q9H346 318 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 FBXL21Q9UKT6 434 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 DTX4Q9Y2E6 619 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 PEX16Q9Y5Y5 336 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 CSNK1G3Q9Y6M4 447 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 SEC16AO15027 2179 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 FUOMA2VDF0 154 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 GUSBP08236 651 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 IFI30P13284 250 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 GFERP55789 205 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 TMEM44Q2T9K0 475 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 NIPAL1Q6NVV3 410 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 BBS1Q8NFJ9 593 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 RNF217Q8TC41 542 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 GATAD2BQ8WXI9 593 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 CD180Q99467 661 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 ENKD1Q9H0I2 346 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 PRTFDC1Q9NRG1 225 aa18.24■□□□□ 0.51
MBD3-209ENST00000592012 EXOSC1Q9Y3B2 195 aaKnown RBP18.24■□□□□ 0.51
MBD3-209ENST00000592012 SDK1Q7Z5N4 2213 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 IGHV5-51A0A0C4DH38 117 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 BLACEA4D250 179 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 CLDN4O14493 209 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 ZNF45Q02386 682 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 NXNL2Q5VZ03 156 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 ZNF613Q6PF04 617 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 GRAMD2AQ8IUY3 354 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 ZNF559Q9BR84 538 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 FOXQ1Q9C009 403 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 NUAK2Q9H093 628 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 MIR1-1HGQ9H1L0 117 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 CBLCQ9ULV8 474 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 PLCL2Q9UPR0 1127 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 TMEM184BQ9Y519 407 aaPredicted RBP18.23■□□□□ 0.51
MBD3-209ENST00000592012 SPIN1Q9Y657 262 aaPredicted RBP18.23■□□□□ 0.51
MBD3-209ENST00000592012 SPEGQ15772 3267 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 ZNF670-ZNF695F2Z2N8 137 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 ADAM11O75078 769 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 TBXA2RP21731 343 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 TGM1P22735 817 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 ZNF267Q14586 743 aaPredicted RBP18.23■□□□□ 0.51
MBD3-209ENST00000592012 DEFB133Q30KQ1 61 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 LRIT3Q3SXY7 679 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 GARNL3Q5VVW2 1013 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 TMPRSS11FQ6ZWK6 438 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 ZNF554Q86TJ5 538 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 ZNF614Q8N883 585 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 ZNF485Q8NCK3 441 aa18.23■□□□□ 0.51
MBD3-209ENST00000592012 OR4F15Q8NGB8 312 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms